Transcriptome-Guided Identification of Carbohydrate Active Enzymes (CAZy) from the Christmas Island Red Crab, Gecarcoidea natalis and a Vote for the Inclusion of Transcriptome-Derived Crustacean CAZys in Comparative Studies

cDNA sequences of GHF9 endo-β-1,4-glucanases in terrestrial Crustacea

(2018) Michael Gray et al.   GENE

The systematics of land crabs of the genus Gecarcoidea and recognition of a pseudocryptic species, G. humei, from the eastern Indian Ocean (Crustacea : Decapoda : Gecarcinidae)

(2017) Joelle C. Y. Lai et al.   INVERTEBRATE SYSTEMATICS

Evolution and functional characterization of CAZymes belonging to subfamily 10 of glycoside hydrolase family 5 (GH5_10) in two species of phytophagous beetles

(2017) André Busch et al.   PLoS One

SeqPurge: highly-sensitive adapter trimming for paired-end NGS data

(2016) Marc Sturm et al.   BMC BIOINFORMATICS

TransRate: reference-free quality assessment of de novo transcriptome assemblies

(2016) Richard Smith-Unna et al.   GENOME RESEARCH

Expression and characterization of digestive enzyme genes from hepatopancreatic transcripts from redclaw crayfish (Cherax quadricarinatus )

(2015) L.K. Dammannagoda et al.   AQUACULTURE NUTRITION

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

A glycosyl hydrolase family 16 gene is responsible for the endogenous production of β-1,3-glucanases within decapod crustaceans

(2015) Stuart M. Linton et al.   GENE

First comprehensive multi-tissue transcriptome of Cherax quadricarinatus (Decapoda: Parastacidae) reveals unexpected diversity of endogenous cellulase

(2015) Mun Hua Tan et al.   ORGANISMS DIVERSITY & EVOLUTION

Bridger: a new framework for de novo transcriptome assembly using RNA-seq data

(2015) Zheng Chang et al.   GENOME BIOLOGY

Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads

(2015) Li Song et al.   GigaScience

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Digestive enzymes of two brachyuran and two anomuran land crabs from Christmas Island, Indian Ocean

(2014) Stuart M. Linton et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Deciphering key features in protein structures with the new ENDscript server

(2014) Xavier Robert et al.   NUCLEIC ACIDS RESEARCH

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Characterisation of cellulose and hemicellulose digestion in land crabs with special reference to Gecarcoidea natalis

(2012) Benjamin J. Allardyce et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Isozymes from the herbivorous gecarcinid land crab, Gecarcoidea natalis that possess both lichenase and endo-β-1,4-glucanase activity

(2011) Stuart M. Linton et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Identification of activity related amino acid mutations of a GH9 termite cellulase

(2010) Jinfeng Ni et al.   BIORESOURCE TECHNOLOGY

An endo-β-1,4-mannanase, AkMan, from the common sea hare Aplysia kurodai

(2010) Umme Afsari Zahura et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

The last piece in the cellulase puzzle: the characterisation of  -glucosidase from the herbivorous gecarcinid land crab Gecarcoidea natalis

(2010) B. J. Allardyce et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Molecular insight into lignocellulose digestion by a marine isopod in the absence of gut microbes

(2010) A. J. King et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

On the Arachnida, Myriopoda, and Land-Crustacea of Christmas Island

(2010) R. I. Pocock   PROCEEDINGS OF THE ZOOLOGICAL SOCIETY OF LONDON

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Putative endogenous xylanase from brackish-water clam Corbicula japonica

(2009) Kentaro Sakamoto et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Molecular cloning of endogenous β-glucosidase from common Japanese brackish water clam Corbicula japonica

(2009) Kentaro Sakamoto et al.   GENE

An overview of mannan structure and mannan-degrading enzyme systems

(2008) L. R. S. Moreira et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Molecular cloning and characterization of a novel cold-active β-1,4-d-mannanase from the Antarctic springtail, Cryptopygus antarcticus

(2008) Jung Min Song et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Purification and characterisation of endo- -1,4-glucanase and laminarinase enzymes from the gecarcinid land crab Gecarcoidea natalis and the aquatic crayfish Cherax destructor

(2008) B. J. Allardyce et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH

Recruitment dynamics in a rainforest seedling community: context-independent impact of a keystone consumer

(2008) Peter T. Green et al.   OECOLOGIA