Multivariate Analysis of Multiple Datasets: a Practical Guide for Chemical Ecology

mixOmics: An R package for ‘omics feature selection and multiple data integration

(2017) Florian Rohart et al.   PLoS Computational Biology

The interaction between the proliferating macroalga Asparagopsis taxiformis and the coral Astroides calycularis induces changes in microbiome and metabolomic fingerprints

(2017) Stéphane Greff et al.   Scientific Reports

Dimension reduction techniques for the integrative analysis of multi-omics data

(2016) Chen Meng et al.   BRIEFINGS IN BIOINFORMATICS

A chemo-ecologists’ practical guide to compositional data analysis

(2016) Adrian Brückner et al.   CHEMOECOLOGY

Regularized MANOVA (rMANOVA) in untargeted metabolomics

(2015) J. Engel et al.   ANALYTICA CHIMICA ACTA

Photoperiod-Induced Geographic Variation in Plant Defense Chemistry

(2015) J. H. Reudler et al.   JOURNAL OF CHEMICAL ECOLOGY

Analysis of variance of designed chromatographic data sets: The analysis of variance-target projection approach

(2015) Federico Marini et al.   JOURNAL OF CHROMATOGRAPHY A

Variable selection for generalized canonical correlation analysis

(2014) A. Tenenhaus et al.   BIOSTATISTICS

Manipulating Feeding Stimulation to Protect Crops Against Insect Pests?

(2014) Maxime R. Hervé et al.   JOURNAL OF CHEMICAL ECOLOGY

Population Diversity in Cuticular Hydrocarbons and mtDNA in a Mountain Social Wasp

(2014) Mariaelena Bonelli et al.   JOURNAL OF CHEMICAL ECOLOGY

Partial least squares discriminant analysis: taking the magic away

(2014) Richard G. Brereton et al.   JOURNAL OF CHEMOMETRICS

Floral scent emitted by white and coloured morphs in orchids

(2014) L. Dormont et al.   PHYTOCHEMISTRY

Daily Rhythm of Mutualistic Pollinator Activity and Scent Emission in Ficus septica: Ecological Differentiation between Co-Occurring Pollinators and Potential Consequences for Chemical Communication and Facilitation of Host Speciation

(2014) Lucie Conchou et al.   PLoS One

Global, local and unique decompositions in OnPLS for multiblock data analysis

(2013) Tommy Löfstedt et al.   ANALYTICA CHIMICA ACTA

Reflections on univariate and multivariate analysis of metabolomics data

(2013) Edoardo Saccenti et al.   Metabolomics

Breaking with trends in pre-processing?

(2013) Jasper Engel et al.   TRAC-TRENDS IN ANALYTICAL CHEMISTRY

A novel approach for biomarker selection and the integration of repeated measures experiments from two assays

(2012) Benoit Liquet et al.   BMC BIOINFORMATICS

OnPLS path modelling

(2012) Tommy Löfstedt et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

A review of variable selection methods in Partial Least Squares Regression

(2012) Tahir Mehmood et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Dealing with Distances and Transformations for Fuzzy C-Means Clustering of Compositional Data

(2012) Javier Palarea-Albaladejo et al.   JOURNAL OF CLASSIFICATION

Visualising associations between paired ‘omics’ data sets

(2012) Ignacio González et al.   BioData Mining

Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems

(2011) Kim-Anh Lê Cao et al.   BMC BIOINFORMATICS

Dissimilarity partial least squares applied to non-linear modeling problems

(2011) P. Zerzucha et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Double-check: validation of diagnostic statistics for PLS-DA models in metabolomics studies

(2011) Ewa Szymańska et al.   Metabolomics

Regularized Generalized Canonical Correlation Analysis

(2011) Arthur Tenenhaus et al.   PSYCHOMETRIKA

Exploring the Links between Natural Products and Bacterial Assemblages in the SpongeAplysina aerophoba

(2010) Oriol Sacristán-Soriano et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Some common misunderstandings in chemometrics

(2010) Karin Kjeldahl et al.   JOURNAL OF CHEMOMETRICS

Metabolic fingerprinting as an indicator of biodiversity: towards understanding inter-specific relationships among Homoscleromorpha sponges

(2010) Julijana Ivanišević et al.   Metabolomics

A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis

(2009) D. M. Witten et al.   BIOSTATISTICS

Principal component analysis for compositional data with outliers

(2009) Peter Filzmoser et al.   ENVIRONMETRICS

Canonical partial least squares-a unified PLS approach to classification and regression problems

(2009) Ulf G. Indahl et al.   JOURNAL OF CHEMOMETRICS

Multivariate paired data analysis: multilevel PLSDA versus OPLSDA

(2009) Johan A. Westerhuis et al.   Metabolomics

Integrating multiple 'omics' analysis for microbial biology: application and methodologies

(2009) W. Zhang et al.   MICROBIOLOGY-SGM

Extensions of Sparse Canonical Correlation Analysis with Applications to Genomic Data

(2009) Daniela M Witten et al.   Statistical Applications in Genetics and Molecular Biology

Notes on the practical utility of OPLS

(2009) Henri S. Tapp et al.   TRAC-TRENDS IN ANALYTICAL CHEMISTRY

Wake Up and Smell the Roses: The Ecology and Evolution of Floral Scent

(2008) Robert A. Raguso   Annual Review of Ecology Evolution and Systematics

Powered partial least squares discriminant analysis

(2008) Kristian Hovde Liland et al.   JOURNAL OF CHEMOMETRICS

Multilevel Data Analysis of a Crossover Designed Human Nutritional Intervention Study

(2008) Ewoud J. J. van Velzen et al.   JOURNAL OF PROTEOME RESEARCH

Assessment of PLSDA cross validation

(2008) Johan A. Westerhuis et al.   Metabolomics

Sparse principal component analysis via regularized low rank matrix approximation

(2007) Haipeng Shen et al.   JOURNAL OF MULTIVARIATE ANALYSIS