Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees
出版年份 2015 全文链接
标题
Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees
作者
关键词
-
出版物
Genome Biology and Evolution
Volume 7, Issue 6, Pages 1455-1473
出版商
Oxford University Press (OUP)
发表日期
2015-05-08
DOI
10.1093/gbe/evv079
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut
- (2015) Kirsten M Ellegaard et al. BMC GENOMICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- The chromosomal accommodation and domestication of mobile genetic elements
- (2014) Marie Touchon et al. CURRENT OPINION IN MICROBIOLOGY
- Lactobacillus apinorum sp. nov., Lactobacillus mellifer sp. nov., Lactobacillus mellis sp. nov., Lactobacillus melliventris sp. nov., Lactobacillus kimbladii sp. nov., Lactobacillus helsingborgensis sp. nov. and Lactobacillus kullabergensis sp. nov., isolated from the honey stomach of the honeybee Apis mellifera
- (2014) T. C. Olofsson et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Activities at the Universal Protein Resource (UniProt)
- (2014) NUCLEIC ACIDS RESEARCH
- Location of the unique integration site on an Escherichia coli chromosome by bacteriophage lambda DNA in vivo
- (2014) A. Tal et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Hidden Diversity in Honey Bee Gut Symbionts Detected by Single-Cell Genomics
- (2014) Philipp Engel et al. PLoS Genetics
- Proteins of novel lactic acid bacteria from Apis mellifera mellifera: an insight into the production of known extra-cellular proteins during microbial stress
- (2013) Èile Butler et al. BMC MICROBIOLOGY
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Do Honeybees Shape the Bacterial Community Composition in Floral Nectar?
- (2013) Yana Aizenberg-Gershtein et al. PLoS One
- Microbial Gut Diversity of Africanized and European Honey Bee Larval Instars
- (2013) Svjetlana Vojvodic et al. PLoS One
- Microbial Ecology of the Hive and Pollination Landscape: Bacterial Associates from Floral Nectar, the Alimentary Tract and Stored Food of Honey Bees (Apis mellifera)
- (2013) Kirk E. Anderson et al. PLoS One
- A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella
- (2013) Lionel Guy et al. PLoS Genetics
- Comparative Genomics of Wolbachia and the Bacterial Species Concept
- (2013) Kirsten Maren Ellegaard et al. PLoS Genetics
- SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
- (2012) Elmar Pruesse et al. BIOINFORMATICS
- Fructophilic Lactobacillus kunkeei and Lactobacillus brevis Isolated from Fresh Flowers, Bees and Bee-hives
- (2012) Deon P. Neveling et al. CURRENT MICROBIOLOGY
- The Adaptation of Temperate Bacteriophages to Their Host Genomes
- (2012) Louis-Marie Bobay et al. MOLECULAR BIOLOGY AND EVOLUTION
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Symbionts as Major Modulators of Insect Health: Lactic Acid Bacteria and Honeybees
- (2012) Alejandra Vásquez et al. PLoS One
- Distinctive Gut Microbiota of Honey Bees Assessed Using Deep Sampling from Individual Worker Bees
- (2012) Nancy A. Moran et al. PLoS One
- Independent Studies Using Deep Sequencing Resolve the Same Set of Core Bacterial Species Dominating Gut Communities of Honey Bees
- (2012) Zakee L. Sabree et al. PLoS One
- Streamlining and Core Genome Conservation among Highly Divergent Members of the SAR11 Clade
- (2012) J. Grote et al. mBio
- A scientific note on the lactic acid bacterial flora within the honeybee subspecies Apis mellifera (Buckfast), A. m. scutellata, A. m. mellifera, and A. m. monticola
- (2011) Tobias C. Olofsson et al. APIDOLOGIE
- The terminal region of the E. coli chromosome localises at the periphery of the nucleoid
- (2011) Jean-Christophe Meile et al. BMC MICROBIOLOGY
- Complete Bacteriophage Transfer in a Bacterial Endosymbiont (Wolbachia) Determined by Targeted Genome Capture
- (2011) Bethany N. Kent et al. Genome Biology and Evolution
- Characterization and emended description of Lactobacillus kunkeei as a fructophilic lactic acid bacterium
- (2011) A. Endo et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Genomic analysis reveals Lactobacillus sanfranciscensis as stable element in traditional sourdoughs
- (2011) Rudi F Vogel et al. Microbial Cell Factories
- Evolution and classification of the CRISPR–Cas systems
- (2011) Kira S. Makarova et al. NATURE REVIEWS MICROBIOLOGY
- PHAST: A Fast Phage Search Tool
- (2011) Y. Zhou et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database
- (2011) M. Punta et al. NUCLEIC ACIDS RESEARCH
- Bees brought to their knees: microbes affecting honey bee health
- (2011) Jay D. Evans et al. TRENDS IN MICROBIOLOGY
- Bacterial communities in floral nectar
- (2011) Svetlana Fridman et al. Environmental Microbiology Reports
- Local Mobile Gene Pools Rapidly Cross Species Boundaries To Create Endemicity within Global Vibrio cholerae Populations
- (2011) Y. Boucher et al. mBio
- genoPlotR: comparative gene and genome visualization in R
- (2010) L. Guy et al. BIOINFORMATICS
- The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell
- (2010) T. Junier et al. BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- A simple and distinctive microbiota associated with honey bees and bumble bees
- (2010) VINCENT G. MARTINSON et al. MOLECULAR ECOLOGY
- GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
- (2010) Amrita Pati et al. NATURE METHODS
- Evolutionary microbial genomics: insights into bacterial host adaptation
- (2010) Christina Toft et al. NATURE REVIEWS GENETICS
- TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations
- (2010) Federico Abascal et al. NUCLEIC ACIDS RESEARCH
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Novel lactic acid bacteria inhibitingPaenibacillus larvaein honey bee larvae
- (2009) Eva Forsgren et al. APIDOLOGIE
- DIYA: a bacterial annotation pipeline for any genomics lab
- (2009) Andrew C. Stewart et al. BIOINFORMATICS
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- The lactic acid bacteria involved in the production of bee pollen and bee bread
- (2009) Alejandra Vásquez et al. JOURNAL OF APICULTURAL RESEARCH
- The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans
- (2009) L. Klasson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A molecular phylogeny of the genusApissuggests that the Giant Honey Bee of the Philippines,A. breviligulaMaa, and the Plains Honey Bee of southern India,A. indicaFabricius, are valid species
- (2009) NATHAN LO et al. SYSTEMATIC ENTOMOLOGY
- Run-Off Replication of Host-Adaptability Genes Is Associated with Gene Transfer Agents in the Genome of Mouse-Infecting Bartonella grahamii
- (2009) Eva C. Berglund et al. PLoS Genetics
- Genomics and Evolution of Heritable Bacterial Symbionts
- (2008) Nancy A. Moran et al. Annual Review of Genetics
- A scientific note on the lactic acid bacterial flora in honeybees in the USA – A comparison with bees from Sweden
- (2008) Alejandra Vásquez et al. APIDOLOGIE
- DNAPlotter: circular and linear interactive genome visualization
- (2008) T. Carver et al. BIOINFORMATICS
- Detection and Identification of a Novel Lactic Acid Bacterial Flora Within the Honey Stomach of the Honeybee Apis mellifera
- (2008) Tobias C. Olofsson et al. CURRENT MICROBIOLOGY
- SPECIALIZATION AND GEOGRAPHIC ISOLATION AMONGWOLBACHIASYMBIONTS FROM ANTS AND LYCAENID BUTTERFLIES
- (2008) Jacob A. Russell et al. EVOLUTION
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Comparative analysis of CRISPR loci in lactic acid bacteria genomes
- (2008) Philippe Horvath et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- A comparison of homologous recombination rates in bacteria and archaea
- (2008) Michiel Vos et al. ISME Journal
- Learning how to live together: genomic insights into prokaryote–animal symbioses
- (2008) Andrés Moya et al. NATURE REVIEWS GENETICS
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