Barcoded Pyrosequencing Reveals a Shift in the Bacterial Community in the Rhizosphere and Rhizoplane of Rehmannia glutinosa under Consecutive Monoculture

Spatial Distribution Patterns of Root-Associated Bacterial Communities Mediated by Root Exudates in Different Aged Ratooning Tea Monoculture Systems

(2017) Yasir Arafat et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Diversity and composition of rhizospheric soil and root endogenous bacteria inPanax notoginsengduring continuous cropping practices

(2017) Yong Tan et al.   JOURNAL OF BASIC MICROBIOLOGY

Distinct roles for soil fungal and bacterial communities associated with the suppression of vanilla Fusarium wilt disease

(2017) Wu Xiong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial Interactions in the Phyllosphere Increase Plant Performance under Herbivore Biotic Stress

(2017) Muhammad Saleem et al.   Frontiers in Microbiology

Probiotic strain Stenotrophomonas acidaminiphila BJ1 degrades and reduces chlorothalonil toxicity to soil enzymes, microbial communities and plant roots

(2017) Qingming Zhang et al.   AMB Express

Changes in soil bacterial community structure as a result of incorporation of Brassica plants compared with continuous planting eggplant and chemical disinfection in greenhouses

(2017) Tianzhu Li et al.   PLoS One

The role of organic acids on microbial deterioration in the Radix pseudostellariae rhizosphere under continuous monoculture regimes

(2017) Hongmiao Wu et al.   Scientific Reports

Secondary metabolite genes encoded by potato rhizosphere microbiomes in the Andean highlands are diverse and vary with sampling site and vegetation stage

(2017) Gajender Aleti et al.   Scientific Reports

Microbial community analysis of apple rhizosphere around Bohai Gulf

(2017) Jihang Jiang et al.   Scientific Reports

Corky root severity, root knot nematode galling and microbial communities in soil, rhizosphere and rhizoplane in organic and conventional greenhouse compartments

(2016) Ariena H.C. van Bruggen et al.   APPLIED SOIL ECOLOGY

Dynamic change of the rhizosphere microbial community in response to growth stages of consecutively monocultured Rehmanniae glutinosa

(2016) Qingxiang Yang et al.   BIOLOGIA

Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression

(2016) Menno van der Voort et al.   ECOLOGY LETTERS

Microbial community structure and its temporal changes in Rehmannia glutinosa rhizospheric soils monocultured for different years

(2016) Linkun Wu et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Performance of 16s rDNA Primer Pairs in the Study of Rhizosphere and Endosphere Bacterial Microbiomes in Metabarcoding Studies

(2016) Bram Beckers et al.   Frontiers in Microbiology

Microbial Profiling of a Suppressiveness-Induced Agricultural Soil Amended with Composted Almond Shells

(2016) Carmen Vida et al.   Frontiers in Microbiology

Declined soil suppressiveness to Fusarium oxysporum by rhizosphere microflora of cotton in soil sickness

(2015) Xiaogang Li et al.   BIOLOGY AND FERTILITY OF SOILS

Fungal invasion of the rhizosphere microbiome

(2015) Emilie Chapelle et al.   ISME Journal

Isolation, Identification, and Autotoxicity Effect of Allelochemicals from Rhizosphere Soils of Flue-Cured Tobacco

(2015) Xia Ren et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Nicotiana Roots Recruit Rare Rhizosphere Taxa as Major Root-Inhabiting Microbes

(2015) Muhammad Saleem et al.   MICROBIAL ECOLOGY

Soils naturally suppressive to banana Fusarium wilt disease harbor unique bacterial communities

(2015) Zongzhuan Shen et al.   PLANT AND SOIL

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant-microbe rhizosphere interactions mediated by Rehmannia glutinosa root exudates under consecutive monoculture

(2015) Linkun Wu et al.   Scientific Reports

Manipulating the banana rhizosphere microbiome for biological control of Panama disease

(2015) Chao Xue et al.   Scientific Reports

Allelopathic and autotoxicity effects of barley (Hordeum vulgare L. ssp. vulgare) root exudates

(2014) Imen Bouhaouel et al.   BIOCONTROL

Effects of bio-organic fertilizer plus soil amendment on the control of tobacco bacterial wilt and composition of soil bacterial communities

(2014) Kai Wu et al.   BIOLOGY AND FERTILITY OF SOILS

Homogeneity of the Vaginal Microbiome at the Cervix, Posterior Fornix, and Vaginal Canal in Pregnant Chinese Women

(2014) Yi-E Huang et al.   MICROBIAL ECOLOGY

Different Continuous Cropping Spans Significantly Affect Microbial Community Membership and Structure in a Vanilla-Grown Soil as Revealed by Deep Pyrosequencing

(2014) Wu Xiong et al.   MICROBIAL ECOLOGY

Functional Soil Microbiome: Belowground Solutions to an Aboveground Problem

(2014) V. Lakshmanan et al.   PLANT PHYSIOLOGY

Microbial Community Diversities and Taxa Abundances in Soils along a Seven-Year Gradient of Potato Monoculture Using High Throughput Pyrosequencing Approach

(2014) Xing Liu et al.   PLoS One

Soil sickness of peanuts is attributable to modifications in soil microbes induced by peanut root exudates rather than to direct allelopathy

(2014) Xiao-gang Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Assessment of shifts in microbial community structure and catabolic diversity in response to Rehmannia glutinosa monoculture

(2013) Linkun Wu et al.   APPLIED SOIL ECOLOGY

Plant-Soil Feedbacks and Soil Sickness: From Mechanisms to Application in Agriculture

(2013) Li-Feng Huang et al.   JOURNAL OF CHEMICAL ECOLOGY

The rhizobacterium Arthrobacter agilis produces dimethylhexadecylamine, a compound that inhibits growth of phytopathogenic fungi in vitro

(2013) Crisanto Velázquez-Becerra et al.   PROTOPLASMA

Bacterial chitin degradation—mechanisms and ecophysiological strategies

(2013) Sara Beier et al.   Frontiers in Microbiology

Apple Replant Disease: Role of Microbial Ecology in Cause and Control

(2012) Mark Mazzola et al.   Annual Review of Phytopathology

Use of beneficial bacteria and their secondary metabolites to control grapevine pathogen diseases

(2012) Stéphane Compant et al.   BIOCONTROL

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

Plant growth-promoting rhizobacteria (PGPR): their potential as antagonists and biocontrol agents

(2012) Anelise Beneduzi et al.   GENETICS AND MOLECULAR BIOLOGY

Identification of Autotoxic Compounds in Fibrous Roots of Rehmannia (Rehmannia glutinosa Libosch.)

(2012) Zhen-Fang Li et al.   PLoS One

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Meeting the demand for crop production: the challenge of yield decline in crops grown in short rotations

(2011) Amanda J. Bennett et al.   BIOLOGICAL REVIEWS

Differential miRNA expression in Rehmannia glutinosa plants subjected to continuous cropping

(2011) Yanhui Yang et al.   BMC PLANT BIOLOGY

A new bioorganic fertilizer can effectively control banana wilt by strong colonization with Bacillus subtilis N11

(2011) Nan Zhang et al.   PLANT AND SOIL

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Isolation, selection, and characterization of beneficial rhizobacteria from pea, lentil, and chickpea grown in western Canada

(2010) Russell K. Hynes et al.   CANADIAN JOURNAL OF MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Culture-independent molecular techniques for soil microbial ecology

(2010) Penny R. Hirsch et al.   SOIL BIOLOGY & BIOCHEMISTRY

Comparing microarrays and next-generation sequencing technologies for microbial ecology research

(2010) Seong Woon Roh et al.   TRENDS IN BIOTECHNOLOGY

Helping plants to deal with insects: the role of beneficial soil-borne microbes

(2010) Ana Pineda et al.   TRENDS IN PLANT SCIENCE

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL

Non-parametric multivariate comparisons of soil fungal composition: Sensitivity to thresholds and indications of structural redundancy in T-RFLP data

(2008) Lauren T. Bennett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities

(2006) Farah Ahmad et al.   MICROBIOLOGICAL RESEARCH