Chloroplast Protein Turnover: The Influence of Extraplastidic Processes, Including Autophagy

Increases in activity of proteasome and papain-like cysteine protease in Arabidopsis autophagy mutants: back-up compensatory effect or cell-death promoting effect?

(2018) Marien Havé et al.   JOURNAL OF EXPERIMENTAL BOTANY

Vacuolar Protein Degradation via Autophagy Provides Substrates to Amino Acid Catabolic Pathways as an Adaptive Response to Sugar Starvation in Arabidopsis thaliana

(2018) Takaaki Hirota et al.   PLANT AND CELL PHYSIOLOGY

Delaying chloroplast turnover increases water-deficit stress tolerance through the enhancement of nitrogen assimilation in rice

(2017) Nir Sade et al.   JOURNAL OF EXPERIMENTAL BOTANY

E3 Ubiquitin Ligases: Ubiquitous Actors in Plant Development and Abiotic Stress Responses

(2017) Kai Shu et al.   PLANT AND CELL PHYSIOLOGY

Entire Photodamaged Chloroplasts Are Transported to the Central Vacuole by Autophagy

(2017) Masanori Izumi et al.   PLANT CELL

Autophagy Deficiency Compromises Alternative Pathways of Respiration following Energy Deprivation in Arabidopsis thaliana

(2017) Jessica A.S. Barros et al.   PLANT PHYSIOLOGY

Apple autophagy-related protein MdATG3s afford tolerance to multiple abiotic stresses

(2017) Ping Wang et al.   PLANT SCIENCE

Plant ESCRT Complexes: Moving Beyond Endosomal Sorting

(2017) Caiji Gao et al.   TRENDS IN PLANT SCIENCE

Autophagy Is Rapidly Induced by Salt Stress and Is Required for Salt Tolerance in Arabidopsis

(2017) Liming Luo et al.   Frontiers in Plant Science

Chloroplast Proteases: Updates on Proteolysis within and across Suborganellar Compartments

(2016) Kenji Nishimura et al.   PLANT PHYSIOLOGY

Protein Maturation and Proteolysis in Plant Plastids, Mitochondria, and Peroxisomes

(2015) Klaas J. van Wijk   Annual Review of Plant Biology

Autophagy contributes to regulation of the hypoxia response during submergence inArabidopsis thaliana

(2015) Liang Chen et al.   Autophagy

Regulation of Chloroplast Protein Import by the Ubiquitin E3 Ligase SP1 Is Important for Stress Tolerance in Plants

(2015) Qihua Ling et al.   CURRENT BIOLOGY

Amino Acid Catabolism in Plants

(2015) Tatjana M. Hildebrandt et al.   Molecular Plant

Receptor-mediated selective autophagy degrades the endoplasmic reticulum and the nucleus

(2015) Keisuke Mochida et al.   NATURE

Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization

(2015) Faqiang Li et al.   PLANT CELL

The Endosomal Protein CHARGED MULTIVESICULAR BODY PROTEIN1 Regulates the Autophagic Turnover of Plastids in Arabidopsis

(2015) Christoph Spitzer et al.   PLANT CELL

Activation of autophagy by unfolded proteins during endoplasmic reticulum stress

(2015) Xiaochen Yang et al.   PLANT JOURNAL

Establishment of Monitoring Methods for Autophagy in Rice Reveals Autophagic Recycling of Chloroplasts and Root Plastids during Energy Limitation

(2015) Masanori Izumi et al.   PLANT PHYSIOLOGY

The Impact of the Branched-Chain Ketoacid Dehydrogenase Complex on Amino Acid Homeostasis in Arabidopsis

(2015) Cheng Peng et al.   PLANT PHYSIOLOGY

Autophagy Supports Biomass Production and Nitrogen Use Efficiency at the Vegetative Stage in Rice

(2015) Shinya Wada et al.   PLANT PHYSIOLOGY

Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts

(2015) J. D. Woodson et al.   SCIENCE

OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development

(2014) Takamitsu Kurusu et al.   Autophagy

Organ-specific quality control of plant peroxisomes is mediated by autophagy

(2014) K. Yoshimoto et al.   JOURNAL OF CELL SCIENCE

Impact of increasing Ultraviolet-B (UV-B) radiation on photosynthetic processes

(2014) Sunita Kataria et al.   JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY

Chaperone and Protease Functions of LON Protease 2 Modulate the Peroxisomal Transition and Degradation with Autophagy

(2014) Shino Goto-Yamada et al.   PLANT AND CELL PHYSIOLOGY

AUTOPHAGY-RELATED11 Plays a Critical Role in General Autophagy- and Senescence-Induced Mitophagy in Arabidopsis

(2014) F. Li et al.   PLANT CELL

Arabidopsis ATG8-INTERACTING PROTEIN1 Is Involved in Autophagy-Dependent Vesicular Trafficking of Plastid Proteins to the Vacuole

(2014) S. Michaeli et al.   PLANT CELL

Stress-Induced Chloroplast Degradation inArabidopsisIs Regulated via a Process Independent of Autophagy and Senescence-Associated Vacuoles

(2014) Songhu Wang et al.   PLANT CELL

Photosystem II photoinhibition-repair cycle protects Photosystem I from irreversible damage

(2013) Mikko Tikkanen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Roles of autophagy in chloroplast recycling

(2013) Hiroyuki Ishida et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

In vivo inhibition of cysteine proteases provides evidence for the involvement of ‘senescence-associated vacuoles’ in chloroplast protein degradation during dark-induced senescence of tobacco leaves

(2013) Cristian A. Carrión et al.   JOURNAL OF EXPERIMENTAL BOTANY

Biogenesis and homeostasis of chloroplasts and other plastids

(2013) Paul Jarvis et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Physiological and metabolic consequences of autophagy deficiency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availability

(2013) Anne Guiboileau et al.   NEW PHYTOLOGIST

Autophagy-Related Proteins Are Required for Degradation of Peroxisomes in Arabidopsis Hypocotyls during Seedling Growth

(2013) J. Kim et al.   PLANT CELL

Disrupting Autophagy Restores Peroxisome Function to an Arabidopsis lon2 Mutant and Reveals a Role for the LON2 Protease in Peroxisomal Matrix Protein Degradation

(2013) L. M. Farmer et al.   PLANT CELL

Highly Oxidized Peroxisomes Are Selectively Degraded via Autophagy in Arabidopsis

(2013) M. Shibata et al.   PLANT CELL

Autophagy Contributes to Nighttime Energy Availability for Growth in Arabidopsis

(2013) M. Izumi et al.   PLANT PHYSIOLOGY

The Ubiquitin Code

(2012) David Komander et al.   Annual Review of Biochemistry

Starch turnover: pathways, regulation and role in growth

(2012) Mark Stitt et al.   CURRENT OPINION IN PLANT BIOLOGY

Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis

(2012) Anne Guiboileau et al.   NEW PHYTOLOGIST

Degradation of the Endoplasmic Reticulum by Autophagy during Endoplasmic Reticulum Stress in Arabidopsis

(2012) Y. Liu et al.   PLANT CELL

A New Type of Compartment, Defined by Plant-Specific Atg8-Interacting Proteins, Is Induced upon Exposure of Arabidopsis Plants to Carbon Starvation

(2012) A. Honig et al.   PLANT CELL

Evidence for contribution of autophagy to Rubisco degradation during leaf senescence inArabidopsis thaliana

(2012) YUKI ONO et al.   PLANT CELL AND ENVIRONMENT

The Expanding Universe of Ubiquitin and Ubiquitin-Like Modifiers

(2012) R. D. Vierstra   PLANT PHYSIOLOGY

Heterologous Expression of ATG8c from Soybean Confers Tolerance to Nitrogen Deficiency and Increases Yield in Arabidopsis

(2012) Tongmei Xia et al.   PLoS One

Chloroplast Biogenesis Is Regulated by Direct Action of the Ubiquitin-Proteasome System

(2012) Q. Ling et al.   SCIENCE

The Cullin-RING Ubiquitin-Protein Ligases

(2011) Zhihua Hua et al.   Annual Review of Plant Biology

Autophagy: Renovation of Cells and Tissues

(2011) Noboru Mizushima et al.   CELL

Genome-Wide Identification, Classification, and Expression Analysis of Autophagy-Associated Gene Homologues in Rice (Oryza sativa L.)

(2011) K. Xia et al.   DNA RESEARCH

The ATG1/ATG13 Protein Kinase Complex Is Both a Regulator and a Target of Autophagic Recycling in Arabidopsis

(2011) A. Suttangkakul et al.   PLANT CELL

Protein degradation – an alternative respiratory substrate for stressed plants

(2011) Wagner L. Araújo et al.   TRENDS IN PLANT SCIENCE

Nitrogen uptake, assimilation and remobilization in plants: challenges for sustainable and productive agriculture

(2010) Céline Masclaux-Daubresse et al.   ANNALS OF BOTANY

Atg8-family interacting motif crucial for selective autophagy

(2010) Nobuo N. Noda et al.   FEBS LETTERS

PINK1 stabilized by mitochondrial depolarization recruits Parkin to damaged mitochondria and activates latent Parkin for mitophagy

(2010) Noriyuki Matsuda et al.   JOURNAL OF CELL BIOLOGY

Selective autophagy: ubiquitin-mediated recognition and beyond

(2010) Claudine Kraft et al.   NATURE CELL BIOLOGY

Identification of the 2-Hydroxyglutarate and Isovaleryl-CoA Dehydrogenases as Alternative Electron Donors Linking Lysine Catabolism to the Electron Transport Chain of Arabidopsis Mitochondria

(2010) W. L. Araujo et al.   PLANT CELL

ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci

(2010) Taijoon Chung et al.   PLANT JOURNAL

The Autophagic Degradation of Chloroplasts via Rubisco-Containing Bodies Is Specifically Linked to Leaf Carbon Status But Not Nitrogen Status in Arabidopsis

(2010) M. Izumi et al.   PLANT PHYSIOLOGY

Photoprotection in plants: a new light on photosystem II damage

(2010) Shunichi Takahashi et al.   TRENDS IN PLANT SCIENCE

PINK1 Is Selectively Stabilized on Impaired Mitochondria to Activate Parkin

(2010) Derek P. Narendra et al.   PLOS BIOLOGY

Autophagy is required for tolerance of drought and salt stress in plants

(2009) Yimo Liu et al.   Autophagy

Atg32 Is a Mitochondrial Protein that Confers Selectivity during Mitophagy

(2009) Tomotake Kanki et al.   DEVELOPMENTAL CELL

Mitochondria-Anchored Receptor Atg32 Mediates Degradation of Mitochondria via Selective Autophagy

(2009) Koji Okamoto et al.   DEVELOPMENTAL CELL

Dynamics and diversity in autophagy mechanisms: lessons from yeast

(2009) Hitoshi Nakatogawa et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Autophagy Negatively Regulates Cell Death by Controlling NPR1-Dependent Salicylic Acid Signaling during Senescence and the Innate Immune Response in Arabidopsis

(2009) K. Yoshimoto et al.   PLANT CELL

PINK1-dependent recruitment of Parkin to mitochondria in mitophagy

(2009) C. Vives-Bauza et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell

(2008) M. M. Chaves et al.   ANNALS OF BOTANY

Sensing and Responding to Excess Light

(2008) Zhirong Li et al.   Annual Review of Plant Biology

The ATG12-Conjugating Enzyme ATG10 Is Essential for Autophagic Vesicle Formation in Arabidopsis thaliana

(2008) A. R. Phillips et al.   GENETICS

Parkin is recruited selectively to impaired mitochondria and promotes their autophagy

(2008) Derek Narendra et al.   JOURNAL OF CELL BIOLOGY

‘Senescence-associated vacuoles’ are involved in the degradation of chloroplast proteins in tobacco leaves

(2008) Dana E. Martínez et al.   PLANT JOURNAL

The ATG Autophagic Conjugation System in Maize: ATG Transcripts and Abundance of the ATG8-Lipid Adduct Are Regulated by Development and Nutrient Availability

(2008) T. Chung et al.   PLANT PHYSIOLOGY

Autophagy Plays a Role in Chloroplast Degradation during Senescence in Individually Darkened Leaves

(2008) S. Wada et al.   PLANT PHYSIOLOGY

Mobilization of Rubisco and Stroma-Localized Fluorescent Proteins of Chloroplasts to the Vacuole by an ATG Gene-Dependent Autophagic Process

(2008) H. Ishida et al.   PLANT PHYSIOLOGY

Convergent energy and stress signaling

(2008) Elena Baena-González et al.   TRENDS IN PLANT SCIENCE