Improving accuracies of genomic predictions for drought tolerance in maize by joint modeling of additive and dominance effects in multi-environment trials

The contribution of dominance to phenotype prediction in a pine breeding and simulated population

(2016) J E de Almeida Filho et al.   HEREDITY

GenoMatrix: A Software Package for Pedigree-Based and Genomic Prediction Analyses on Complex Traits

(2016) Alireza Nazarian et al.   JOURNAL OF HEREDITY

Genomic Selection in Multi-environment Crop Trials

(2016) Helena Oakey et al.   G3-Genes Genomes Genetics

This Month in The Journal

(2015) Sarah Ratzel et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Ridge, Lasso and Bayesian additive-dominance genomic models

(2015) Camila Ferreira Azevedo et al.   BMC GENETICS

Relative Efficiency of Genomewide Selection for Testcross Performance of Doubled Haploid Lines in a Maize Breeding Program

(2015) Lisa-Marie Krchov et al.   CROP SCIENCE

Genetic Gains in Grain Yield Through Genomic Selection in Eight Bi-parental Maize Populations under Drought Stress

(2015) Yoseph Beyene et al.   CROP SCIENCE

Multiple endosymbiont infections and reproductive manipulations in a linyphiid spider population

(2015) M M Curry et al.   HEREDITY

Integrating Nonadditive Genomic Relationship Matrices into the Study of Genetic Architecture of Complex Traits

(2015) Alireza Nazarian et al.   JOURNAL OF HEREDITY

Genome-Enabled Estimates of Additive and Nonadditive Genetic Variances and Prediction of Apple Phenotypes Across Environments

(2015) Satish Kumar et al.   G3-Genes Genomes Genetics

Increased Prediction Accuracy in Wheat Breeding Trials Using a Marker × Environment Interaction Genomic Selection Model

(2015) Marco Lopez-Cruz et al.   G3-Genes Genomes Genetics

Genome Properties and Prospects of Genomic Prediction of Hybrid Performance in a Breeding Program of Maize

(2014) Frank Technow et al.   GENETICS

Unraveling Additive from Nonadditive Effects Using Genomic Relationship Matrices

(2014) Patricio R. Muñoz et al.   GENETICS

Genomic prediction in biparental tropical maize populations in water-stressed and well-watered environments using low-density and GBS SNPs

(2014) X Zhang et al.   HEREDITY

Breeding drought-tolerant maize hybrids for the US corn-belt: discovery to product

(2014) Mark Cooper et al.   JOURNAL OF EXPERIMENTAL BOTANY

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Factor analytic mixed models for the provision of grower information from national crop variety testing programs

(2014) Alison B. Smith et al.   THEORETICAL AND APPLIED GENETICS

Factor analytic and reduced animal models for the investigation of additive genotype-by-environment interaction in outcrossing plant species with application to a Pinus radiata breeding programme

(2014) Brian R. Cullis et al.   THEORETICAL AND APPLIED GENETICS

Drought Tolerance in Maize: Indirect Selection through Secondary Traits versus Genomewide Selection

(2013) Cathrine Ziyomo et al.   CROP SCIENCE

On the Additive and Dominant Variance and Covariance of Individuals Within the Genomic Selection Scope

(2013) Z. G. Vitezica et al.   GENETICS

Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions

(2013) Nicolas Heslot et al.   THEORETICAL AND APPLIED GENETICS

Genomic Prediction of Breeding Values when Modeling Genotype × Environment Interaction using Pedigree and Dense Molecular Markers

(2012) Juan Burgueño et al.   CROP SCIENCE

Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)

(2012) M. F. R. Resende et al.   GENETICS

Genomic prediction of hybrid performance in maize with models incorporating dominance and population specific marker effects

(2012) Frank Technow et al.   THEORETICAL AND APPLIED GENETICS

nadiv: an R package to create relatedness matrices for estimating non-additive genetic variances in animal models

(2012) Matthew E. Wolak   Methods in Ecology and Evolution

Phenotyping for drought tolerance of crops in the genomics era

(2012) Roberto Tuberosa   Frontiers in Physiology

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Haplotype Mapping of a Diploid Non-Meiotic Organism Using Existing and Induced Aneuploidies

(2007) Melanie Legrand et al.   PLoS Genetics