4.4 Article

The abrogation of condensin function provides independent evidence for defining the self-renewing population of pluripotent stem cells

期刊

DEVELOPMENTAL BIOLOGY
卷 433, 期 2, 页码 218-226

出版社

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.ydbio.2017.07.023

关键词

Pluripotency; Condensins; Endoreplication; Endocycling; RNAi; Self-renewal

资金

  1. Medical Research Council [MR/M000133/1]
  2. Biotechnology and Biological Sciences Research Council [BB/K007564/1]
  3. Human Frontier Science Program fellowship
  4. Elizabeth Hannah Jenkinson Fund
  5. Marie Sklodowska Curie individual fellowship by Horizon
  6. Clarendon Scholarship
  7. BBSRC [BB/L026627/1, BB/K007564/1] Funding Source: UKRI
  8. MRC [MR/M000133/1] Funding Source: UKRI
  9. Biotechnology and Biological Sciences Research Council [BB/L026627/1, BB/K007564/1] Funding Source: researchfish
  10. Medical Research Council [MR/M000133/1] Funding Source: researchfish

向作者/读者索取更多资源

Heterogeneity of planarian stem cells has been categorised on the basis of single cell expression analyses and subsequent experiments to demonstrate lineage relationships. Some data suggest that despite heterogeneity in gene expression amongst cells in the cell cycle, in fact only one sub-population, known as sigma neoblasts, can self-renew. Without the tools to perform live in vivo lineage analysis, we instead took an alternative approach to provide independent evidence for defining the self-renewing stem cell population. We exploited the role of highly conserved condensin family genes to functionally assay neoblast self-renewal properties. Condensins are involved in forming properly condensed chromosomes to allow cell division to proceed during mitosis, and their abrogation inhibits mitosis and can lead to repeated endoreplication of the genome in cells that make repeated attempts to divide. We fmd that planarians possess only the condensin I complex, and that this is required for normal stem cell function. Abrogation of condensin function led to rapid stem cell depletion accompanied by the appearance of 'giant' cells with increased DNA content. Using previously discovered markers of heterogeneity we show that enlarged cells are always from the sigma-class of the neoblast population and we never observe evidence for endoreplication for the other neoblast subclasses. Overall, our data establish that condensins are essential for stem cell maintenance and provide independent evidence that only sigma-neoblasts are capable of multiple rounds of cell division and hence self-renewal.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.4
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Biochemistry & Molecular Biology

Microbial protection favors parasite tolerance and alters host-parasite coevolutionary dynamics

Charlotte Rafaluk-Mohr, Michael Gerth, Jordan E. Sealey, Alice K. E. Ekroth, Aziz A. Aboobaker, Anke Kloock, Kayla C. King

Summary: The study found that protective host microbiota can influence the coevolutionary patterns and processes between hosts and parasites, by suppressing parasite infection and altering parasite adaptation to microbial defenses. This finding is significant for understanding the interactions between hosts and parasites.

CURRENT BIOLOGY (2022)

Letter Public, Environmental & Occupational Health

Re. Weight Change and the Onset of Cardiovascular Diseases: Emulating Trials Using Electronic Health Records Respond

Michail Katsoulis, Bianca De Stavola, Alvina G. Lai, Manuel Gomes, Karla Diaz-Ordaz

EPIDEMIOLOGY (2022)

Article Medicine, Research & Experimental

Increased burden of cardiovascular disease in people with liver disease: unequal geographical variations, risk factors and excess years of life lost

Wai Hoong Chang, Stefanie H. Mueller, Sheng-Chia Chung, Graham R. Foster, Alvina G. Lai

Summary: This study investigated the burden, risk, and premature mortality of cardiovascular disease (CVD) in patients with liver disease. The findings revealed a higher incidence rate of CVD in liver disease patients, along with associations between specific clinical factors and CVD risk. Geographical variations in burden were also observed. These findings are important for improving cardiovascular health management in liver disease patients.

JOURNAL OF TRANSLATIONAL MEDICINE (2022)

Article Biochemistry & Molecular Biology

Cumulative burden of psychiatric disorders and self-harm across 26 adult cancers

Wai Hoong Chang, Alvina G. Lai

Summary: Cancer patients experience considerable psychological distress, with depression being the most common psychiatric disorder. Chemotherapy, radiotherapy, and surgery increase the burden of psychiatric disorders, especially alkylating agent chemotherapeutics. All mental illnesses are associated with an increased risk of subsequent self-harm, with the highest risk occurring within 12 months of diagnosis. Patients who harm themselves are at a significantly higher risk of dying from unnatural causes within the first 12 months.

NATURE MEDICINE (2022)

Editorial Material Oncology

There is no health without mental health: Challenges ignored and lessons learned

Alvina G. Lai, Wai Hoong Chang

CLINICAL AND TRANSLATIONAL MEDICINE (2022)

Review Oncology

Pan-cancer prognostic genetic mutations and clinicopathological factors associated with survival outcomes: a systematic review

Jurgita Kaubryte, Alvina G. Lai

Summary: This study systematically evaluated clinicopathological factors and genetic mutations associated with prognosis in multiple cancer types, providing a comprehensive knowledge base of biomarkers for personalized treatment, which may guide healthcare practitioners and researchers across the continuum of cancer care.

NPJ PRECISION ONCOLOGY (2022)

Article Psychiatry

Depression, anxiety, substance misuse and self-harm in children and young people with rare chronic liver disease

Wai Hoong Chang, Graham R. Foster, Deirdre A. Kelly, Alvina G. Lai

Summary: This population cohort study in England found a high burden of psychiatric events, such as anxiety disorder, depression, substance misuse, and self-harm, in young people with chronic liver disease compared to matched controls. The risk of these psychiatric disorders was significantly increased in participants with liver disease.

BJPSYCH OPEN (2022)

Article Cardiac & Cardiovascular Systems

Impact of anti-arrhythmic drugs and catheter ablation on the survival of patients with atrial fibrillation: a population study based on 199 433 new-onset atrial fibrillation patients in the UK

Sheng-Chia Chung, Alvina Lai, Gregory Y. H. Lip, Pier D. Lambiase, Rui Providencia

Summary: Using real-world data from the UK, this study aimed to investigate the effectiveness of anti-arrhythmic drugs and catheter ablation in improving the survival of atrial fibrillation patients. The study found that patients receiving rhythm control treatment had lower mortality rates, with pulmonary vein isolation showing the most pronounced survival benefit.

EUROPACE (2023)

Article Biology

Identification of putative enhancer-like elements predicts regulatory networks active in planarian adult stem cells

Jakke Neiro, Divya Sridhar, Anish Dattani, Aziz Aboobaker

Summary: By integrating epigenetic and expression data, we predicted enhancer elements active in adult stem cells that are responsible for regeneration. These enhancers are enriched with binding sites for transcription factors expressed in adult stem cells, and footprinting analysis supported their occupancy in these cells. Our study contributes to understanding the regulatory mechanisms of stem cells and the process of regeneration.
Article Genetics & Heredity

Aggregation tests identify new gene associations with breast cancer in populations with diverse ancestry

Stefanie H. Mueller, Alvina G. Lai, Maria Valkovskaya, Kyriaki Michailidou, Manjeet K. Bolla, Qin Wang, Joe Dennis, Michael Lush, Zomoruda Abu-Ful, Thomas U. Ahearn, Irene L. Andrulis, Hoda Anton-Culver, Natalia N. Antonenkova, Volker Arndt, Kristan J. Aronson, Annelie Augustinsson, Thais Baert, Laura E. Beane Freeman, Matthias W. Beckmann, Sabine Behrens, Javier Benitez, Marina Bermisheva, Carl Blomqvist, Natalia Bogdanova, Stig E. Bojesen, Bernardo Bonanni, Hermann Brenner, Sara Y. Brucker, Saundra S. Buys, Jose E. Castelao, Tsun L. Chan, Jenny Chang-Claude, Stephen J. Chanock, Ji-Yeob Choi, Wendy K. Chung, Sarah Colonna, Sten Cornelissen, Fergus J. Couch, Kamila Czene, Mary B. Daly, Peter Devilee, Thilo Dork, Laure Dossus, Miriam Dwek, Diana M. Eccles, Arif B. Ekici, A. Heather Eliassen, Christoph Engel, D. Gareth Evans, Peter A. Fasching, Olivia Fletcher, Henrik Flyger, Manuela Gago-Dominguez, Yu-Tang Gao, Montserrat Garcia-Closas, Jose A. Garcia-Saenz, Jeanine Genkinger, Aleksandra Gentry-Maharaj, Felix Grassmann, Pascal Guenel, Melanie Gundert, Lothar Haeberle, Eric Hahnen, Christopher A. Haiman, Niclas Hakansson, Per Hall, Elaine F. Harkness, Patricia A. Harrington, Jaana M. Hartikainen, Mikael Hartman, Alexander Hein, Weang-Kee Ho, Maartje J. Hooning, Reiner Hoppe, John L. Hopper, Richard S. Houlston, Anthony Howell, David J. Hunter, Dezheng Huo, Abctb Investigators, Hidemi Ito, Motoki Iwasaki, Anna Jakubowska, Wolfgang Janni, Esther M. John, Michael E. Jones, Audrey Jung, Rudolf Kaaks, Daehee Kang, Elza K. Khusnutdinova, Sung-Won Kim, Cari M. Kitahara, Stella Koutros, Peter Kraft, Vessela N. Kristensen, Katerina Kubelka-Sabit, Allison W. Kurian, Ava Kwong, James Lacey, Diether Lambrechts, Loic Le Marchand, Jingmei Li, Martha Linet, Wing-Yee Lo, Jirong Long, Artitaya Lophatananon, Arto Mannermaa, Mehdi Manoochehri, Sara Margolin, Keitaro Matsuo, Dimitrios Mavroudis, Usha Menon, Kenneth Muir, Rachel A. Murphy, Heli Nevanlinna, William G. Newman, Dieter Niederacher, Katie M. O'Brien, Nadia Obi, Kenneth Offit, Olufunmilayo Olopade, Andrew F. Olshan, Hakan Olsson, Sue K. Park, Alpa Patel, Achal Patel, Charles M. Perou, Julian Peto, Paul D. P. Pharoah, Dijana Plaseska-Karanfilska, Nadege Presneau, Brigitte Rack, Paolo Radice, Dhanya Ramachandran, Muhammad U. Rashid, Gad Rennert, Atocha Romero, Kathryn J. Ruddy, Matthias Ruebner, Emmanouil Saloustros, Dale P. Sandler, Elinor J. Sawyer, Marjanka K. Schmidt, Rita K. Schmutzler, Michael O. Schneider, Christopher Scott, Mitul Shah, Priyanka Sharma, Chen-Yang Shen, Xiao-Ou Shu, Jacques Simard, Harald Surowy, Rulla M. Tamimi, William J. Tapper, Jack A. Taylor, Soo Hwang Teo, Lauren R. Teras, Amanda E. Toland, Rob A. E. M. Tollenaar, Diana Torres, Gabriela Torres-Mejia, Melissa A. Troester, Therese Truong, Celine M. Vachon, Joseph Vijai, Clarice R. Weinberg, Camilla Wendt, Robert Winqvist, Alicja Wolk, Anna H. Wu, Taiki Yamaji, Xiaohong R. Yang, Jyh-Cherng Yu, Wei Zheng, Argyrios Ziogas, Elad Ziv, Alison M. Dunning, Douglas F. Easton, Harry Hemingway, Ute Hamann, Karoline B. Kuchenbaecker

Summary: This study identified 14 genes associated with breast cancer using gene-based aggregation analysis, including two newly discovered genes FMNL3 and AC058822.1. Furthermore, associations with established candidate genes like ESR1 were found through the collaboration of multi-ancestral cohorts, highlighting the importance of diversifying study cohorts. These findings provide new insights into the development of breast cancer.

GENOME MEDICINE (2023)

Article Biochemistry & Molecular Biology

Injury primes mutation-bearing astrocytes for dedifferentiation in later life

Holly Simpson Ragdale, Melanie Clements, Wenhao Tang, Elitza Deltcheva, Catia Andreassi, Alvina G. Lai, Wai Hoong Chang, Maria Pandrea, Ivan Andrew, Laurence Game, Imran Uddin, Michael Ellis, Tariq Enver, Antonella Riccio, Samuel Marguerat, Simona Parrinello

Summary: Most normal parenchymal astrocytes are unable to dedifferentiate to neural stem cells after injury, while aberrant lineage plasticity is a characteristic of gliomas. In this study, it was found that p53 loss destabilizes the identity of astrocytes, making them more prone to dedifferentiation. This is caused by persistent neuroinflammation and EGFR activation, and involves the upregulation of mTOR signaling downstream of p53 loss and EGFR.

CURRENT BIOLOGY (2023)

Article Multidisciplinary Sciences

Cumulative burden of 144 conditions, critical care hospitalisation and premature mortality across 26 adult cancers

Wai Hoong Chang, Richard D. Neal, Martin D. Forster, Alvina G. Lai

Summary: This study evaluated the burden of 144 health conditions and critical care admissions in 243,767 adults with 26 adult cancers and treatment modalities. The top conditions by fold difference in cumulative burden in survivors compared to controls were haematology, immunology/infection, and pulmonary conditions. Patients receiving chemotherapy, radiotherapy, and surgery had a higher burden of late morbidities compared to those receiving radiotherapy alone. The top five cancers with the highest cumulative burden of critical care admissions were bone, brain, spinal cord and nervous system, testis, and Hodgkin lymphoma.

NATURE COMMUNICATIONS (2023)

Article Medicine, General & Internal

Hospital admissions linked to SARS-CoV-2 infection in children and adolescents: cohort study of 3.2 million first ascertained infections in England

Harrison Wilde, Christopher Tomlinson, Bilal A. Mateen, David Selby, Hari Krishnan Kanthimathinathan, Padmanabhan Ramnarayan, Pascale Du Pre, Mae Johnson, Nazima Pathan, Arturo Gonzalez-Izquierdo, Alvina G. Lai, Deepti Gurdasani, Christina Pagel, Spiros Denaxas, Sebastian Vollmer, Katherine Brown

Summary: This cohort study examined hospital admissions associated with SARS-CoV-2 infection in children and adolescents in England. The results showed that most admissions were due to SARS-CoV-2 or SARS-CoV-2 was a contributory factor. Boys, younger children, and those from ethnic minority groups or areas of high deprivation were more likely to be admitted to hospital. These findings have implications for public health initiatives and further research.

BMJ-BRITISH MEDICAL JOURNAL (2023)

Article Genetics & Heredity

Saturation genome editing of 11 codons and exon 13 of BRCA2 coupled with chemotherapeutic drug response accurately determines pathogenicity of variants

Sounak Sahu, Teresa L. Sullivan, Alexander Y. Mitrophanov, Melissa Galloux, Darryl Nousome, Eileen Southon, Dylan Caylor, Arun Prakash Mishra, Christine N. Evans, Michelle E. Clapp, Sandra Burkett, Tyler Malys, Raj Chari, Kajal Biswas, Shyam K. Sharan

Summary: This study describes the development of a high-throughput functional assay using CRISPR-Cas9 technology to determine the functional significance of a large number of variants in the BRCA2 gene. By saturating specific codons and exons of BRCA2, the study successfully categorizes the functional and non-functional variants, and demonstrates the response of these variants to DNA-damaging agents.

PLOS GENETICS (2023)

Article Medical Informatics

COVID-19 trajectories among 57 million adults in England: a cohort study using electronic health records

Johan H. Thygesen, Christopher Tomlinson, Sam Hollings, Mehrdad A. Mizani, Alex Handy, Ashley Akbari, Amitava Banerjee, Jennifer Cooper, Alvina G. Lai, Kezhi Li, Bilal A. Mateen, Naveed Sattar, Reecha Sofat, Ana Torralbo, Honghan Wu, Angela Wood, Jonathan A. C. Sterne, Christina Pagel, William N. Whiteley, Cathie Sudlow, Harry Hemingway, Spiros Denaxas

Summary: This study used nationwide linked electronic health records to define and validate ten COVID-19 phenotypes, providing insights into the different stages and transitions of the disease. The results showed infection rates, hospitalization rates, intensive care unit usage, and mortality rates of COVID-19. Longer patient trajectories were observed in the second wave compared to the first wave.

LANCET DIGITAL HEALTH (2022)

Review Developmental Biology

Exploring the roles of noncoding RNAs in craniofacial abnormalities: A systematic review

Cheng Shi, Pengfei Jiao, Zhiyi Chen, Lan Ma, Siyue Yao

Summary: This review discusses the molecular etiology of congenital craniofacial abnormalities, with a focus on the role and mechanism of noncoding RNAs in regulating craniofacial development. Aberrant expression of noncoding RNAs has been implicated in the pathogenesis of craniofacial abnormalities, providing potential therapeutic targets.

DEVELOPMENTAL BIOLOGY (2024)

Article Developmental Biology

From soap bubbles to multicellular organisms: Unraveling the role of cell adhesion and physical constraints in tile pattern formation and tissue morphogenesis

Hideru Togashi, Steven Ray Davis, Makoto Sato

Summary: Tile patterns, regulated by cell adhesion molecules, are regular arrangements of cells that play important functional roles in multicellular organisms. The physical constraints and cell adhesion regulate both cell shape and tissue morphogenesis.

DEVELOPMENTAL BIOLOGY (2024)

Article Developmental Biology

Experimental validation and characterization of putative targets of Escargot and STAT, two master regulators of the intestinal stem cells in Drosophila melanogaster

Armen Khanbabei, Lina Segura, Cynthia Petrossian, Aaron Lemus, Ithan Cano, Courtney Frazier, Armen Halajyan, Donnie Ca, Mariano Loza-Coll

Summary: This article investigates the genetic regulatory mechanisms of Drosophila intestinal stem cells. The study found that most target genes co-regulated by Esg and STAT show a consistent gene expression pattern. However, manipulating these validated targets in vivo rarely replicated the effects of manipulating Esg and STAT, suggesting the presence of complex genetic interactions among the downstream targets of these two master regulator genes.

DEVELOPMENTAL BIOLOGY (2024)

Article Developmental Biology

Islet architecture in adult mice is actively maintained by Robo2 expression in β cells

Bayley J. Waters, Zoe R. Birman, Matthew R. Wagner, Julia Lemanski, Barak Blum

Summary: Researchers found that conditional deletion of Robo2 in adult mice led to a significant loss of islet architecture without affecting beta cell identity or function, suggesting that Robo2 plays a role in actively maintaining adult islet architecture. Understanding the factors required for islet architecture maintenance is crucial for developing future diabetes therapies.

DEVELOPMENTAL BIOLOGY (2024)

Article Developmental Biology

Myosin XV is a negative regulator of signaling filopodia during long-range lateral inhibition

Rhiannon Clements, Tyler Smith, Luke Cowart, Jennifer Zhumi, Alan Sherrod, Aidan Cahill, Ginger L. Hunter

Summary: Cell protrusions play a crucial role in regulating cell activities during development. By studying the regulation mechanism in fruit fly sensory bristle patterning, it was found that Myosin XV is essential for the dynamics of signaling filopodia and promotes long-range Notch signaling.

DEVELOPMENTAL BIOLOGY (2024)

Article Developmental Biology

A robust knock-in approach using a minimal promoter and a minicircle

Margaret Keating, Ryan Hagle, Daniel Osorio-Mendez, Anjelica Rodriguez-Parks, Sarah I. Almutawa, Junsu Kang

Summary: Knock-in reporter (KI) animals are essential for studying gene expression in biomedical research. This study developed a new strategy using minicircle technology and a minimal promoter to enhance knock-in events and establish stable KI transgenic reporter lines. The study also highlighted the importance of selecting the proper KI line due to potential inappropriate influence of genome editing on reporter gene expression.

DEVELOPMENTAL BIOLOGY (2024)

Article Developmental Biology

Neurog1 and Olig2 integrate patterning and neurogenesis signals in development of zebrafish dopaminergic and glutamatergic dual transmitter neurons

Christian Altbuerger, Meta Rath, Daniel Armbruster, Wolfgang Driever

Summary: This study reveals that Neurog1 and Olig2 transcription factors have differential requirements for the development of dopaminergic neurons, and they integrate local patterning signals and Notch neurogenic selection signaling to specify the progenitor population and initiate neurogenesis and differentiation.

DEVELOPMENTAL BIOLOGY (2024)