标题
PGAP-X: extension on pan-genome analysis pipeline
作者
关键词
Pan-genomics, Genome visualization, Genetic variation
出版物
BMC GENOMICS
Volume 19, Issue S1, Pages -
出版商
Springer Nature
发表日期
2018-01-19
DOI
10.1186/s12864-017-4337-7
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- PanWeb: A web interface for pan-genomic analysis
- (2017) Yan Pantoja et al. PLoS One
- A Brief Review of Software Tools for Pangenomics
- (2015) Jingfa Xiao et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- PanGP: A tool for quickly analyzing bacterial pan-genome profile
- (2014) Yongbing Zhao et al. BIOINFORMATICS
- ITEP: An integrated toolkit for exploration of microbial pan-genomes
- (2014) Matthew N Benedict et al. BMC GENOMICS
- Genomic reconnaissance of clinical isolates of emerging human pathogen Mycobacterium abscessus reveals high evolutionary potential
- (2014) Siew Woh Choo et al. Scientific Reports
- Comparative Genomics of Bifidobacterium animalis subsp. lactis Reveals a Strict Monophyletic Bifidobacterial Taxon
- (2013) C. Milani et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genetic variability of mutans streptococci revealed by wide whole-genome sequencing
- (2013) Lifu Song et al. BMC GENOMICS
- Pan genome of the phytoplankton Emiliania underpins its global distribution
- (2013) Betsy A. Read et al. NATURE
- Complete genome sequence of Cannes 8 virus, a new member of the proposed family “Marseilleviridae”
- (2013) Sarah Aherfi et al. VIRUS GENES
- Natural Genetic Transformation Generates a Population of Merodiploids in Streptococcus pneumoniae
- (2013) Calum Johnston et al. PLoS Genetics
- Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments
- (2012) B. Dunn et al. GENOME RESEARCH
- Pan-Genomic Analysis Provides Insights into the Genomic Variation and Evolution of Salmonella Paratyphi A
- (2012) Weili Liang et al. PLoS One
- PGAT: a multistrain analysis resource for microbial genomes
- (2011) M. J. Brittnacher et al. BIOINFORMATICS
- PGAP: pan-genomes analysis pipeline
- (2011) Yongbing Zhao et al. BIOINFORMATICS
- Complete genome sequence of a serotype 11A, ST62 Streptococcus pneumoniae invasive isolate
- (2011) Romina Camilli et al. BMC MICROBIOLOGY
- Computational methods for Gene Orthology inference
- (2011) D. M. Kristensen et al. BRIEFINGS IN BIOINFORMATICS
- Whole-genome sequencing of multiple Arabidopsis thaliana populations
- (2011) Jun Cao et al. NATURE GENETICS
- PanCGHweb: a web tool for genotype calling in pangenome CGH data
- (2010) J. R. Bayjanov et al. BIOINFORMATICS
- Interactive microbial genome visualization with GView
- (2010) Aaron Petkau et al. BIOINFORMATICS
- Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
- (2010) Chad Laing et al. BMC BIOINFORMATICS
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Generation of Genic Diversity among Streptococcus pneumoniae Strains via Horizontal Gene Transfer during a Chronic Polyclonal Pediatric Infection
- (2010) N. Luisa Hiller et al. PLoS Pathogens
- Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
- (2010) Claudio Donati et al. GENOME BIOLOGY
- Biogeography of the Sulfolobus islandicus pan-genome
- (2009) M. L. Reno et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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