Diapause in a tropical oil-collecting bee: molecular basis unveiled by RNA-Seq

Comparative transcriptomics support evolutionary convergence of diapause responses across Insecta

(2017) Gregory J. Ragland et al.   PHYSIOLOGICAL ENTOMOLOGY

Changes in histone acetylation as potential mediators of pupal diapause in the flesh fly, Sarcophaga bullata

(2016) J.A. Reynolds et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Transcriptome and proteome analyses reveal complex mechanisms of reproductive diapause in the two-spotted spider mite,Tetranychus urticae

(2016) J.-Y. Zhao et al.   INSECT MOLECULAR BIOLOGY

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

Getting Useful Information from RNA-Seq Contaminants: A Case of Study in the Oil-Collecting BeeTetrapedia diversipesTranscriptome

(2016) Natalia de Souza Araujo et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Insect Heat Shock Proteins During Stress and Diapause

(2015) Allison M. King et al.   Annual Review of Entomology

Annocript: a flexible pipeline for the annotation of transcriptomes able to identify putative long noncoding RNAs

(2015) F. Musacchia et al.   BIOINFORMATICS

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Early transcriptional events linked to induction of diapause revealed by RNAseq in larvae of drosophilid fly, Chymomyza costata

(2015) Rodolphe Poupardin et al.   BMC GENOMICS

Functional circadian clock genes are essential for the overwintering diapause of the Northern house mosquito, Culex pipiens

(2015) M. E. Meuti et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Conservation and modification of genetic and physiological toolkits underpinning diapause in bumble bee queens

(2015) Etya Amsalem et al.   MOLECULAR ECOLOGY

Key molecular processes of the diapause to post-diapause quiescence transition in the alfalfa leafcutting beeMegachile rotundataidentified by comparative transcriptome analysis

(2015) George D. Yocum et al.   PHYSIOLOGICAL ENTOMOLOGY

Pollen consumed by the solitary beeTetrapedia diversipes(Apidae: Tetrapediini) in a tropical agroecosystem

(2014) Cynthia Maria De Lyra Neves et al.   GRANA

Mosquito Diapause

(2013) David L. Denlinger et al.   Annual Review of Entomology

Overwintering strategies in the red mason solitary bee—physiological correlates of midgut metabolic activity and turnover of nutrient reserves in females of Osmia bicornis

(2013) Oskar Wasielewski et al.   APIDOLOGIE

Genome wide gene-expression analysis of facultative reproductive diapause in the two-spotted spider mite Tetranychus urticae

(2013) Astrid Bryon et al.   BMC GENOMICS

Interdisciplinary dialogue for education, collaboration, and innovation: Intelligent Biology and Medicine in and beyond 2013

(2013) Bing Zhang et al.   BMC GENOMICS

Genome wide microarray based expression profiles during early embryogenesis in diapause induced and non-diapause eggs of polyvoltine silkworm Bombyx mori

(2013) Sirigineedi Sasibhushan et al.   GENOMICS

Transcriptional evidence for small RNA regulation of pupal diapause in the flesh fly, Sarcophaga bullata

(2013) Julie A. Reynolds et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Evolutionary Links Between Circadian Clocks and Photoperiodic Diapause in Insects

(2013) M. E. Meuti et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Polycomb Repressive Complex 2 (PRC2) Protein ESC Regulates Insect Developmental Timing by Mediating H3K27me3 and Activating Prothoracicotropic Hormone Gene Expression

(2013) Yu-Xuan Lu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

RNA-Seq reveals early distinctions and late convergence of gene expression between diapause and quiescence in the Asian tiger mosquito, Aedes albopictus

(2013) M. F. Poelchau et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Circadian clock geneClockis involved in the photoperiodic response of the bean bugRiptortus pedestris

(2013) TOMOKO IKENO et al.   PHYSIOLOGICAL ENTOMOLOGY

Deep sequencing reveals complex mechanisms of diapause preparation in the invasive mosquito, Aedes albopictus

(2013) M. F. Poelchau et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Epigenetics for behavioral ecologists

(2012) C. C. Ledon-Rettig et al.   BEHAVIORAL ECOLOGY

Histone Recognition and Large-Scale Structural Analysis of the Human Bromodomain Family

(2012) Panagis Filippakopoulos et al.   CELL

Cell cycle regulation during development and dormancy in embryos of the annual killifishAustrofundulus limnaeus

(2012) Jason E. Podrabsky et al.   CELL CYCLE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Cross-talk between the fat body and brain regulates insect developmental arrest

(2012) W.-H. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Identification of gene expression changes associated with the initiation of diapause in the brain of the cotton bollworm, Helicoverpa armigera

(2011) Bin Bao et al.   BMC GENOMICS

Elucidating the Biochemical Overwintering Adaptations of LarvalCucujus clavipes puniceus, a Nonmodel Organism, via High Throughput Proteomics

(2011) Martin A. Carrasco et al.   JOURNAL OF PROTEOME RESEARCH

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Maternity-related plasticity in circadian rhythms of bumble-bee queens

(2011) A. Eban-Rothschild et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Energetics of Insect Diapause

(2010) Daniel A. Hahn et al.   Annual Review of Entomology

Photoperiodic diapause under the control of circadian clock genes in an insect

(2010) Tomoko Ikeno et al.   BMC BIOLOGY

Gene expression, metabolic regulation and stress tolerance during diapause

(2010) Thomas H. MacRae   CELLULAR AND MOLECULAR LIFE SCIENCES

The regulation of expression of insect cuticle protein genes

(2010) J.P. Charles   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

The Social Clock of the Honeybee

(2010) Guy Bloch   JOURNAL OF BIOLOGICAL RHYTHMS

Proteomic and Phosphoproteomic Analysis at Diapause Initiation in the Cotton Bollworm,Helicoverpa armigera

(2010) Yu-Xuan Lu et al.   JOURNAL OF PROTEOME RESEARCH

HBO1 Is Required for H3K14 Acetylation and Normal Transcriptional Activity during Embryonic Development

(2010) A. J. Kueh et al.   MOLECULAR AND CELLULAR BIOLOGY

Many sequence-specific chromatin modifying protein-binding motifs show strong positional preferences for potential regulatory regions in the Saccharomyces cerevisiae genome

(2010) Loren Hansen et al.   NUCLEIC ACIDS RESEARCH

Mechanisms of suspended animation are revealed by transcript profiling of diapause in the flesh fly

(2010) G. J. Ragland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell cycle arrest as a hallmark of insect diapause: Changes in gene transcription during diapause induction in the drosophilid fly, Chymomyza costata

(2009) Vladimír Koštál et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Analysis of pupal head proteome and its alteration in diapausing pupae of Helicoverpa armigera

(2009) Lizhen Chen et al.   JOURNAL OF INSECT PHYSIOLOGY

Molecular characterization of heat shock protein 90, 70 and 70 cognate cDNAs and their expression patterns during thermal stress and pupal diapause in the corn earworm

(2009) Qirui Zhang et al.   JOURNAL OF INSECT PHYSIOLOGY

Pupal Cuticle Protein Is Abundant During Early Adult Diapause in the MosquitoCulex pipiens

(2009) Aiqing Li et al.   JOURNAL OF MEDICAL ENTOMOLOGY

Histone H4 lysine 16 acetylation regulates cellular lifespan

(2009) Weiwei Dang et al.   NATURE

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

(2009) Peter J. A. Cock et al.   NUCLEIC ACIDS RESEARCH

Deciphering Proteomic Signatures of Early Diapause in Nasonia

(2009) Florian Wolschin et al.   PLoS One

C. elegans dauer formation and the molecular basis of plasticity

(2008) N. Fielenbach et al.   GENES & DEVELOPMENT