Article
Plant Sciences
Norikazu Ohnishi, Manabu Sugimoto, Hideki Kondo, Ken-ichi Shioya, Lingang Zhang, Wataru Sakamoto
Summary: Vesicle-inducing protein in plastid 1 (VIPP1) is a membrane-remodeling factor that plays a role in thylakoid membrane formation and maintenance in photosynthetic organisms. This study found that VIPP1 has nucleotide hydrolytic activity and forms oligomers, but the properties of VIPP1 differ among species.
FRONTIERS IN PLANT SCIENCE
(2022)
Article
Multidisciplinary Sciences
Julia Carrillo-Garcia, Victor Herrera-Fernandez, Selma A. Serra, Fanny Rubio-Moscardo, Marina Vogel-Gonzalez, Pablo Donate-Macian, Covadonga F. Hevia, Cristina Pujades, Miguel A. Valverde
Summary: Mechanical forces play a role in cytokinesis by activating the mechanosensitive Piezo1 channel at the intercellular bridge; inhibition of Piezo1 leads to multinucleation. Piezo1 generates Ca2+ signals to facilitate ALIX delivery to the intercellular bridge.
Article
Neurosciences
Ji-In Vivien Choi, Boriana K. Tchernookova, Wasan Kumar, Lech Kiedrowski, Calla Goeke, Marina Guizzetti, John Larson, Matthew A. Kreitzer, Robert Paul Malchow
Summary: This study showed that ATP can induce increases in extracellular H+ flux by activating astrocytes, independently of bicarbonate transport. Furthermore, ATP directly activates ATP receptors to induce rises in calcium and H+, with little involvement of Na+/H+ exchangers.
FRONTIERS IN CELLULAR NEUROSCIENCE
(2021)
Editorial Material
Cell Biology
Jeanne C. Stachowiak, Tomas Kirchhausen
Summary: For the past 40 years, minimal reconstituted systems have played a crucial role in advancing our understanding of membrane traffic, and recent developments have allowed for more precise and informative insights.
NATURE CELL BIOLOGY
(2022)
Article
Chemistry, Inorganic & Nuclear
Fujun Yao, Xun Liu, Chaoqun Wu, Xin Yang, Yan Wang, Wenyuan Hu, Chonghua Pei
Summary: This study investigates the biomimetic potential of using amorphous CaCO3 (ACC) to mimic crustacean exoskeletons and optimize their physical and chemical properties. The researchers prepared monodisperse ACC microspheres with high sphericity and hardness using the gas diffusion method in the presence of Mg2+. The stability of ACC was found to be affected by environmental conditions, but the microspheres showed high stability under ambient conditions. This research provides guidance for the preparation of ACC biomimetic composites and enhances the understanding of biomineralization mechanisms.
INORGANIC CHEMISTRY
(2022)
Article
Chemistry, Multidisciplinary
Ye Hwan Lee, Hanki Eom, Sang Moon Lee, Sung Su Kim
Summary: This research article investigates the effects of pH and metal composition on selective calcium extraction from steel slag. It concludes that under specific conditions, calcium can be efficiently extracted with limited amounts of other metals.
Article
Engineering, Environmental
Javier Bravo-Venegas, Ines Prado-Acebo, Beatriz Gullon, Thelmo A. Lu-Chau, Gemma Eibes
Summary: Apple pomace (AP), a lignocellulosic residue, can be used to produce butanol by acetone-butanol-ethanol (ABE) fermentation. The prevention of acid crash occurrence in C. beijerinckii CECT 508 cultures was optimized by adjusting pH, CaCO3 concentration, and culture temperature. The optimal conditions of pH 7, 6.8 g/L CaCO3, and 30 degrees C resulted in a butanol production of 10.75 g/L. Additionally, the comparison between the supernatant of AP hydrolysate and the full hydrolysate indicated the possibility of eliminating the centrifugation step and achieving a zero-waste approach.
Article
Multidisciplinary Sciences
Hong Dong, Bao Zhao, Jianwen Chen, Zihao Liu, Xinghui Li, Lupeng Li, Haitao Wen
Summary: Mitochondria play a crucial role in regulating innate immune function by controlling the repair of phagolysosomal membranes and promoting NLRP3 inflammasome activation. This mechanism links mitochondrial metabolism, immune cell function, and the development of inflammatory responses.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2022)
Article
Physics, Multidisciplinary
Billie Meadowcroft, Ivan Palaia, Anna-Katharina Pfitzner, Aurelie Roux, Buzz Baum, Andela Saric
Summary: We propose a mechanism of sequentially exchanging filament composition to increase filament curvature and develop a kinetic model for composite filament assembly. Our study shows that this sequential polymer assembly mechanism reduces the energetic barrier for membrane deformation.
PHYSICAL REVIEW LETTERS
(2022)
Article
Multidisciplinary Sciences
Luochao Zhao, Xia Sun, Xueyang Wang, Sheng Qin, Yunhui Kong, Muwang Li
Summary: This study reveals the involvement of BmVps13d protein in silk yield of B. mori and investigates its function using the CRISPR/Cas9 system. The findings provide important insights into the molecular mechanism of silk yield and the breeding of silkworms with high silk yield.
Article
Agriculture, Dairy & Animal Science
Stiphany Tieu, Federico Harte
Summary: This study aimed to improve acid and rennet milk gelation properties by mild thermal and pH changes to skim milk. The results indicated that increasing the pH at heating can enhance the gel strength and reduce the gelation time of the milk gel at lower heating temperatures.
JOURNAL OF DAIRY SCIENCE
(2022)
Article
Multidisciplinary Sciences
Tzu-Huai Lin, Dana M. Bis-Brewer, Amy E. Sheehan, Louise N. Townsend, Daniel C. Maddison, Stephan Zuchner, Gaynor A. Smith, Marc R. Freeman
Summary: This study found that TSG101 inhibits mitochondrial biogenesis in axons, which is crucial for maintaining mitochondrial numbers and sizes.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2021)
Review
Biochemistry & Molecular Biology
Yan Zhen, Maja Radulovic, Marina Vietri, Harald Stenmark
Summary: The compartmentalization of eukaryotic cells is essential for their viability, with membranes forming boundaries between organelles and the cytosol. Cellular membranes can be compromised by various factors, but there are evolved mechanisms like membrane scission and endocytosis to maintain membrane integrity.
Article
Biochemistry & Molecular Biology
Miriam Baeumers, Katharina Schulz, Thomas Klein
Summary: The ESCRT-III complex plays a role in membrane remodeling in cellular processes, with Shrub and CHMP4 as core members in Drosophila and humans respectively. CHMP4B is identified as the true ortholog of Shrub, while CHMP4A and CHMP4C have diverging activities. LGD proteins' C2 domain has a specific function beyond stability. CHMP4B interacts more efficiently with LGD1 than with LGD2.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Biochemistry & Molecular Biology
Mitzi Diaz-Hernandez, Rosario Javier-Reyna, Diana Martinez-Valencia, Sarita Montano, Esther Orozco
Summary: By studying the active movement and phagocytosis of the trophozoites of Entamoeba histolytica, researchers have discovered the dynamics of the ESCRT protein interactions during phagocytosis. They identified the proteins forming the E. histolytica ESCRT-II complex and their interactions with other molecules involved in phagocytosis. This study provides valuable insights into the phagocytosis process and the function of related proteins.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Microbiology
Cigdem Balkan, Ilkcan Ercan, Esin Isik, Esra Sahin Akdeniz, Orhan Balcioglu, Marie Kodedova, Olga Zimmermannova, Muhammed Dundar, Hana Sychrova, Ahmet Koc
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
(2019)
Article
Biochemistry & Molecular Biology
Zsofia Csaky, Martina Garaiova, Marie Kodedova, Martin Valachovic, Hana Sychrova, Ivan Hapala
Article
Multidisciplinary Sciences
Antoine Deschamps, Anne-Sophie Colinet, Olga Zimmermannova, Hana Sychrova, Pierre Morsomme
SCIENTIFIC REPORTS
(2020)
Article
Biochemistry & Molecular Biology
Klara Papouskova, Michaela Moravcova, Gal Masrati, Nir Ben-Tal, Hana Sychrova, Olga Zimmermannova
Summary: The study demonstrates that some yeast membrane proteins, such as Nha1, rely on interacting with the Erv14 cargo receptor for proper trafficking to the plasma membrane. Specific variants of ScNha1 were found to be dependent on Erv14, shedding light on the functionality and substrate specificity of these proteins.
MOLECULAR MICROBIOLOGY
(2021)
Article
Microbiology
Simona Vaitkiene, Rimantas Daugelavicius, Hana Sychrova, Marie Kodedova
FRONTIERS IN MICROBIOLOGY
(2020)
Article
Biochemistry & Molecular Biology
Francisco J. Ruiz-Castilla, Jan Bieber, Gabriel Caro, Carmen Michan, Hana Sychrova, Jose Ramos
Summary: Wild-type cells of Candida albicans can grow at low potassium concentrations due to the presence of three different types of K+ transporters in their plasma membrane, which are regulated differently in response to saline stress, pH alterations or K+ starvation. Trk1 is the house-keeping transporter, while Acu1 and Hak1 dominate under K+ limiting conditions. Expression of these transporters in Saccharomyces cerevisiae also affects other physiological characteristics, with CaTrk1 being the most effective in maintaining these parameters close to wild-type levels.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
(2021)
Article
Biotechnology & Applied Microbiology
Olga Zimmermannova, Kristina Felcmanova, Lenka Sacka, Anne-Sophie Colinet, Pierre Morsomme, Hana Sychrova
Summary: The balance between potassium and calcium is crucial for cellular functions. While the absence of potassium exporters slightly increases cytosolic calcium, the lack of K+ importers Trk1 and Trk2 significantly impacts calcium response to stress and maintenance of calcium homeostasis.
FEMS YEAST RESEARCH
(2021)
Article
Microbiology
Edgars Dauss, Klara Papouskova, Hana Sychrova, Alexander Rapoport
Summary: The study showed that both plasma membrane and endoplasmic reticulum protein Ist2 play important roles in maintaining the viability of yeast cells during dehydration and rehydration. The low viability of the ist2 mutant strain during dehydration-rehydration stress was due to the lack of Ist2 protein in the endoplasmic reticulum. Additionally, the mutant strain's plasma membrane was unable to fully restore its molecular organization during reactivation, resulting in high permeability regardless of the type of rehydration.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
(2021)
Article
Microbiology
Jakub Masaryk, Hana Sychrova
Summary: Yeasts need a high concentration of potassium to grow, and the Trk1 transporter plays a key role in this process. The affinity of Trk1 changes based on the availability of potassium, and this affinity switch is closely related to the changes in intracellular potassium content and membrane potential. Mutations in specific regions of the Trk1 protein affect its function and localization, highlighting the importance of these regions in Trk1 folding and activity at the plasma membrane.
Article
Biochemistry & Molecular Biology
Diego Velazquez, Vojtech Prusa, Gal Masrati, Elon Yariv, Hana Sychrova, Nir Ben-Tal, Olga Zimmermannova
Summary: This study investigated the functional characteristics of mutated or truncated versions of HsNHA2 using a salt-sensitive Saccharomyces cerevisiae strain. The highly conserved proline 246 in the core of the protein was found to be crucial for ion selectivity. Additionally, the hydrophilic N-terminal part of the protein was shown to allosterically inhibit cation transport of HsNHA2.
Article
Biochemistry & Molecular Biology
Klara Papouskova, Marcos Gomez, Marie Kodedova, Jose Ramos, Olga Zimmermannova, Hana Sychrova
Summary: Trk1 is the main K+ importer in Saccharomyces cerevisiae and plays a crucial role in maintaining ion homeostasis, cell volume, intracellular pH, and plasma-membrane potential. This study compared Trk proteins from four biotechnologically relevant yeasts and found that they had different abilities to support cell growth under various cultivation conditions and uptake of Rb+. It was also discovered that Yarrowia lipolytica Trk1 can improve cell tolerance to low K+ and high salt, while overproduction of S. cerevisiae's own Trk1 is most effective in enhancing cell growth in the presence of highly toxic Li+ ions.
Article
Microbiology
Marie Kodedova, Vojtech Liska, Jiri Mosinger, Hana Sychrova
Summary: In this study, sulfonated polystyrene nanoparticles encapsulating a tetraphenylporphyrin photosensitizer were found to exhibit strong antifungal effects. Activation of the photosensitizer by visible light generated singlet oxygen, enhancing its antifungal action. Additionally, the presence of potassium iodide further potentiated the antifungal activity by producing I2/I3-. The nanoparticles showed no dark toxicity and demonstrated a broad spectrum of antifungal photodynamic effects.
MICROBIOLOGICAL RESEARCH
(2023)