4.5 Review

Learning from structure-based drug design and new antivirals targeting the ribonucleoprotein complex for the treatment of influenza

期刊

EXPERT OPINION ON DRUG DISCOVERY
卷 10, 期 4, 页码 345-371

出版社

TAYLOR & FRANCIS LTD
DOI: 10.1517/17460441.2015.1019859

关键词

antivirals; cap-binding domain; endonuclease domain; neuraminidase and matrix 2 inhibitors; nucleoprotein inhibitors; replication and transcription; resistance ribonucleoprotein complex

资金

  1. Agence Nationale de la Recherche [Blan-130701, Blanc -14-CE09-0017]
  2. HPC resources of IDRIS [2012-076378]
  3. French Infrastructure for Integrated Structural Biology [ANR-10-INSB-05-02]
  4. Alliance Grenobloise pour la Biologie Structurale et Cellulaire Integrees within the Grenoble Partnership for Structural Biology [ANR-10-LABX-49-01]

向作者/读者索取更多资源

Introduction: Influenza viruses are a threat to human health. There are presently only two methods for treating influenza: vaccines, which require yearly updates, and two classes of antivirals that suffer with the problem of resistance by current human influenza viruses; this is especially the case with amantadine and rimantadine. Consequently, there is an urgent need for the development of new antivirals with new mechanisms of action. Areas covered: In this review, the authors focus on viral protein domains, their associated activity and their inhibition by small molecules defined by a structure-based design with a special emphasis on the ribonucleoprotein complex and its inhibitors. Several new classes of antiviral candidates targeting viral replication through individual domains of the polymerase and the nucleoprotein (NP) have been developed through structure-based design. Expert opinion: To date, the antivirals targeting neuraminidase are by far the most developed and potent. Antiviral candidates targeting the NP and polymerase domains are in the pipeline but their pharmacokinetics needs further studies. The recently published structures of the polymerase expand the possibilities for development of new antivirals. Combination therapies targeting conserved viral targets and new cellular proteins or exploiting drug promiscuity hold promises to fight against the emergence of resistance.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.5
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Biology

A brain cyst load-associated antigen is a Toxoplasma gondii biomarker for serodetection of persistent parasites and chronic infection

Celine Dard, Christopher Swale, Marie-Pierre Brenier-Pinchart, Dayana C. Farhat, Valeria Bellini, Marie Gladys Robert, Dominique Cannella, Herve Pelloux, Isabelle Tardieux, Mohamed-Ali Hakimi

Summary: Discovery of the protein BCLA/MAG2 as a specific marker for bradyzoite and cyst envelope in T. gondii has been achieved through genetically engineered parasites. By using lab mice as models, researchers have confirmed that BCLA/MAG2 can stimulate antibody production recognizing bradyzoite and cyst structure. An ELISA assay based on a bacterially produced BCLA recombinant polypeptide has been designed and validated using sera from mice and human patients with toxoplasmosis, showing promising results for detection of persistent T. gondii infection.

BMC BIOLOGY (2021)

Article Biochemistry & Molecular Biology

Antiviral Properties of the NSAID Drug Naproxen Targeting the Nucleoprotein of SARS-CoV-2 Coronavirus

Olivier Terrier, Sebastien Dilly, Andres Pizzorno, Dominika Chalupska, Jana Humpolickova, Evzen Boura, Francis Berenbaum, Stephane Quideau, Bruno Lina, Bruno Feve, Frederic Adnet, Michele Sabbah, Manuel Rosa-Calatrava, Vincent Marechal, Julien Henri, Anny Slama-Schwok

Summary: The study investigates the efficacy of naproxen as an antiviral drug against SARS-CoV-2, finding that it can inhibit viral replication in infected cells and protect respiratory epithelium from damage. Compared to other tested drugs, naproxen combines antiviral and anti-inflammatory properties.

MOLECULES (2021)

Article Biochemistry & Molecular Biology

Distinction between 2′- and 3′-Phosphate Isomers of a Fluorescent NADPH Analogue Led to Strong Inhibition of Cancer Cells Migration

Raoul Manuel, Michelle de Souza Lima, Sebastien Dilly, Sylvain Daunay, Patricia Abbe, Elodie Pramil, Stephanie Solier, Fabienne Guillaumond, Sarah-Simha Tubiana, Alexandre Escargueil, Joao Antonio Pegas Henriques, Nathalie Ferrand, Irene Erdelmeier, Jean-Luc Boucher, Gildas Bertho, Israel Agranat, Stephane Rocchi, Michele Sabbah, Anny Slama Schwok

Summary: Research on specific inhibition of NADPH oxidases (NOX) and NO-synthases (NOS) has attracted great pharmacological interest due to their association with redox stress in tumor cells. The study demonstrated that isolated 2'- and 3'-phosphate isomers of the NADPH analogue NS1 improved the specificity of inhibition by distinguishing between isomeric derivatives. The 2'-phosphate isomer of NS1 showed more pronounced effects on NOS and NOX-dependent physiological responses, with docking and molecular dynamics simulations explaining the specificity at the NADPH site of NOX and NOS.

ANTIOXIDANTS (2021)

Article Biology

A plant-like mechanism coupling m6A reading to polyadenylation safeguards transcriptome integrity and developmental gene partitioning in Toxoplasma

Dayana C. Farhat, Matthew W. Bowler, Guillaume Communie, Dominique Pontier, Lucid Belmudes, Caroline Mas, Charlotte Corrao, Yohann Coute, Alexandre Bougdour, Thierry Lagrange, Mohamed-Ali Hakimi, Christopher Swale

Summary: Proper 3' end processing of mRNAs is crucial for gene expression regulation. This study in T. gondii identifies an m6A-dependent 3'end polyadenylation acting as a transcriptional barrier. Loss of m6A leads to aberrantly elongated chimeric mRNAs due to impaired transcriptional termination. Overall, the results highlight a regulatory mechanism coupling m6A metabolism to cleavage and polyadenylation processes, serving as a guardian against aberrant transcriptional read-throughs.
Review Virology

Sendai Virus and a Unified Model of Mononegavirus RNA Synthesis

Daniel Kolakofsky, Philippe Le Mercier, Machiko Nishio, Martin Blackledge, Thibaut Crepin, Rob W. H. Ruigrok

Summary: VSV and SeV are members of the Mononegavirales order, studying these viruses can provide insights into their genetic information expression and RNA synthesis processes, as well as the characteristics of their nucleocapsid, helping to establish a unified model based on commonalities among these viruses.

VIRUSES-BASEL (2021)

Review Microbiology

Influenza viruses and coronaviruses: Knowns, unknowns, and common research challenges

Olivier Terrier, Mustapha Si-Tahar, Mariette Ducatez, Christophe Chevalier, Andres Pizzorno, Ronan Le Goffic, Thibaut Crepin, Gaelle Simon, Nadia Naffakh

Summary: The development of vaccines against SARS-CoV-2 was a remarkable achievement, but it also highlighted weaknesses in global pandemic response and gaps in our knowledge of coronaviruses and influenza viruses. By reviewing current knowledge of these viruses, common research challenges were identified, emphasizing the need for multidisciplinary approaches and technological innovations to improve preparedness for future pandemics.

PLOS PATHOGENS (2021)

Article Biochemistry & Molecular Biology

Host succinate inhibits influenza virus infection through succinylation and nuclear retention of the viral nucleoprotein

Antoine Guillon, Deborah Brea-Diakite, Adeline Cezard, Alan Wacquiez, Thomas Baranek, Jerome Bourgeais, Frederic Picou, Virginie Vasseur, Lea Meyer, Christophe Chevalier, Adrien Auvet, Jose M. Carballido, Lydie Nadal Desbarats, Florent Dingli, Andrei Turtoi, Audrey Le Gouellec, Florence Fauvelle, Amelie Donchet, Thibaut Crepin, Pieter S. Hiemstra, Christophe Paget, Damarys Loew, Olivier Herault, Nadia Naffakh, Ronan Le Goffic, Mustapha Si-Tahar

Summary: Research has shown that influenza virus infection causes significant changes in lung metabolism, leading to the accumulation of succinate in respiratory fluids. Succinate exhibits powerful antiviral activity by inhibiting influenza virus replication and reducing metabolic disruptions and inflammatory responses. Administering succinate intranasally to mice reduces viral loads in the lungs and improves survival rates. The antiviral mechanism involves succinylation of viral nucleoproteins, which alters their interactions with viral RNA.

EMBO JOURNAL (2022)

Article Cell Biology

Altiratinib blocks Toxoplasma gondii and Plasmodium falciparum development by selectively targeting a spliceosome kinase

Christopher Swale, Valeria Bellini, Matthew W. Bowler, Nardella Flore, Marie-Pierre Brenier-Pinchart, Dominique Cannella, Lucid Belmudes, Caroline Mas, Yohann Coute, Fabrice Laurent, Artur Scherf, Alexandre Bougdour, Mohamed-Ali Hakimi

Summary: The Apicomplexa, a phylum of single-celled protozoa, cause severe parasitic diseases in humans and animals. Current therapeutics are limited by their efficacy and resistance. In this study, altiratinib, originally developed for glioblastoma, is identified as a potential drug candidate with broad spectrum activity against apicomplexans. Altiratinib specifically targets the TgPRP4K of T. gondii and inhibits the development of intracellular parasites. The molecular basis of the inhibitory mechanism and species selectivity is further elucidated.

SCIENCE TRANSLATIONAL MEDICINE (2022)

Article Biochemistry & Molecular Biology

Neuropeptides, New Ligands of SARS-CoV-2 Nucleoprotein, a Potential Link between Replication, Inflammation and Neurotransmission

Julien Henri, Laetitia Minder, Kevin Mohanasundaram, Sebastien Dilly, Anne Goupil-Lamy, Carmelo Di Primo, Anny Slama Schwok

Summary: This study identified new ligands of the nucleoprotein N of SARS-CoV-2 by in silico screening, using a refined Alphafold model of N and molecular dynamic simulations. The ligands, neuropeptides like substance P and enkephalin, impeded RNA binding to N and potentially altered the physiological roles of these neuropeptides. It was suggested that N may link viral replication and long COVID-19 symptoms, and targeted antivirals against N could improve patients' health.

MOLECULES (2022)

Article Biochemistry & Molecular Biology

Caspase Inhibition Modulates Monocyte-Derived Macrophage Polarization in Damaged Tissues

Stephanie Solier, Michele Mondini, Lydia Meziani, Arnaud Jacquel, Catherine Lacout, Tom Vanden Berghe, Yvon Jule, Jean-Claude Martinou, Gerard Pierron, Julie Riviere, Marc Deloger, Corinne Dupuy, Anny Slama-Schwok, Nathalie Droin, Peter Vandenabeele, Patrick Auberger, Eric Deutsch, Jamel El-Benna, Pham My-Chan Dang, Eric Solary

Summary: Circulating monocytes are recruited to damaged tissues to generate macrophages that modulate disease progression. Activation of caspase-3 and caspase-7, located near mitochondria, is involved in the generation of monocyte-derived macrophages stimulated by Colony-stimulating factor-1 (CSF-1). A non-conventional pathway that involves caspases and activates NOX2 is responsible for CSF1-driven monocyte differentiation, and targeting this pathway may have therapeutic implications for modulating macrophage polarization in damaged tissues.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2023)

Editorial Material Virology

Advances in Structural Virology via Cryo-EM in 2022

Guy Schoehn, Florian Chenavier, Thibaut Crepin

VIRUSES-BASEL (2023)

Article Microbiology

CRISPR Screens Identify Toxoplasma Genes That Determine Parasite Fitness in Interferon Gamma-Stimulated Human Cells

Shruthi Krishnamurthy, Parag Maru, Yifan Wang, Mebratu A. Bitew, Debanjan Mukhopadhyay, Yoshiki Yamaryo-Botte, Tatiana C. Paredes-Santos, Lamba O. Sangare, Christopher Swale, Cyrille Y. Botte, Jeroen P. J. Saeij

Summary: This study identified several Toxoplasma genes important for parasite fitness in human cells stimulated with interferon gamma through a genome-wide loss-of-function screen. Knockout of these genes confirmed their importance for parasite growth in interferon gamma-stimulated human cells. Three of these genes showed homology to GRA32, localized to dense granules, and coimmunoprecipitated with each other and GRA32, indicating they might form a complex. Deletion of individual members of this complex led to early parasite egress in interferon gamma-stimulated cells, highlighting the importance of preventing early egress for Toxoplasma fitness in human cells stimulated with interferon gamma.
Review Cell Biology

3'-end mRNA processing within apicomplexan parasites, a patchwork of classic, and unexpected players

Christopher Swale, Mohamed-Ali Hakimi

Summary: The 3'-end processing of mRNA is a co-transcriptional process that involves a complex composed of cleavage and polyadenylation specificity factors (CPSFs) to recognize cis-sequence elements on nascent mRNA and carry out cleavage and polyadenylation reactions. Recent studies have provided a mechanistic understanding of this machinery in yeast or metazoans, and the discovery of small molecule inhibitors of CPSF function has stimulated interest in studying this machinery in Apicomplexa. The CPSF complex integrates a novel reader of the N6-methyladenosine (m6A) in these organisms and bridges m6A metabolism to transcription termination.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2023)

Article Biochemistry & Molecular Biology

Targeting M2 Macrophages with a Novel NADPH Oxidase Inhibitor

Sebastien Dilly, Miguel Romero, Stephanie Solier, Olivier Feron, Chantal Dessy, Anny Slama Schwok

Summary: ROS in cancer cells play a crucial role in regulating cell death, stemness maintenance, and metabolic reprogramming, which are associated with resistance to chemo/immunotherapy. This paper introduces new inhibitors of NADPH oxidase (NOX), which is important in the tumor microenvironment. One of the inhibitors, called Nanoshutter-1 (NS1), decreases tumor-promoting M2 macrophages in human blood monocytes. NS1 disrupts the NOX2 complex in the macrophages' membrane and mitochondria, leading to vasodilation of blood vessels and potential reduction of hypoxia. By targeting specific cells, NOX2-specific inhibitors could provide precision therapies.

ANTIOXIDANTS (2023)

Article Microbiology

Genome-wide CRISPR screen identifies genes synthetically lethal with GRA17, a nutrient channel encoding gene in Toxoplasma

Tatiana C. Paredes-Santos, Mebratu A. Bitew, Christopher Swale, Felipe Rodriguez, Shruthi Krishnamurthy, Yifan Wang, Parag Maru, Lamba Omar Sangare, Jeroen P. J. Saeij

Summary: The study reveals that the proteins GRA17 and GRA23 are essential for the parasite Toxoplasma gondii to acquire nutrients by crossing the vacuole membrane. By conducting a screen in parasites lacking the GRA17 gene, multiple other genes were identified to be critical for the proper localization of dense granule proteins, including GRA17 and GRA23. These findings highlight the importance of these proteins for the parasite's survival and fitness.

PLOS PATHOGENS (2023)

暂无数据