Atopic asthma after rhinovirus-induced wheezing is associated with DNA methylation change in the SMAD3 gene promoter

Epigenome-wide analysis links SMAD3 methylation at birth to asthma in children of asthmatic mothers

(2017) Avery DeVries et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Rhinovirus-induced first wheezing episode predicts atopic but not nonatopic asthma at school age

(2017) Minna Lukkarinen et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Role of viral infections in the development and exacerbation of asthma in children

(2017) Tuomas Jartti et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Role of Matrix Metalloproteinases-1 and -2 in Interleukin-13–Suppressed Elastin in Airway Fibroblasts in Asthma

(2016) Jennifer L. Ingram et al.   AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY

Allergen-driven HLA-G expression and secretion in peripheral blood mononuclear cells from allergic rhinitis patients

(2016) Paola Contini et al.   HUMAN IMMUNOLOGY

Activated prostaglandin D2 receptors on macrophages enhance neutrophil recruitment into the lung

(2016) Katharina Jandl et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Epigenetic Silencing of the Key Antioxidant Enzyme Catalase in Karyotypically Abnormal Human Pluripotent Stem Cells

(2016) Mikko Konki et al.   Scientific Reports

Short- and long-term efficacy of prednisolone for first acute rhinovirus-induced wheezing episode

(2015) Tuomas Jartti et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Sensitization at the first wheezing episode increases risk for long-term asthma therapy

(2015) Minna Lukkarinen et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Cadherin-related family member 3, a childhood asthma susceptibility gene product, mediates rhinovirus C binding and replication

(2015) Yury A. Bochkov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Using beta-binomial regression for high-precision differential methylation analysis in multifactor whole-genome bisulfite sequencing experiments

(2014) Egor Dolzhenko et al.   BMC BIOINFORMATICS

HLA and asthma phenotypes/endotypes: A review

(2014) Eirini Kontakioti et al.   HUMAN IMMUNOLOGY

Comprehensive analysis of DNA methylation data with RnBeads

(2014) Yassen Assenov et al.   NATURE METHODS

The first wheezing episode: respiratory virus etiology, atopic characteristics, and illness severity

(2014) Riitta Turunen et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Rhinovirus Wheezing Illness and Genetic Risk of Childhood-Onset Asthma

(2013) Minal Çalışkan et al.   NEW ENGLAND JOURNAL OF MEDICINE

Prednisolone reduces recurrent wheezing after first rhinovirus wheeze: a 7-year follow-up

(2013) Minna Lukkarinen et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Prospective Multicenter Study of Viral Etiology and Hospital Length of Stay in Children With Severe Bronchiolitis

(2012) Pedro A. Piedra   ARCHIVES OF PEDIATRICS & ADOLESCENT MEDICINE

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Deficient antiviral immune responses in childhood: Distinct roles of atopy and asthma

(2012) Simonetta Baraldo et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

The regulation of fibrosis in airway remodeling in asthma

(2012) Simon G. Royce et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Innate and adaptive immune responses in asthma

(2012) Stephen T Holgate   NATURE MEDICINE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling

(2012) Patrick Boyle et al.   GENOME BIOLOGY

Evidence for a Causal Relationship between Allergic Sensitization and Rhinovirus Wheezing in Early Life

(2011) Daniel J. Jackson et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

(2011) Felix Krueger et al.   BIOINFORMATICS

Infection of dendritic cells with herpes simplex virus type 1 induces rapid degradation of CYTIP, thereby modulating adhesion and migration

(2011) A. A. Theodoridis et al.   BLOOD

Rhinovirus bronchiolitis and recurrent wheezing: 1-year follow-up

(2011) F. Midulla et al.   EUROPEAN RESPIRATORY JOURNAL

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

A Large-Scale, Consortium-Based Genomewide Association Study of Asthma

(2010) Miriam F. Moffatt et al.   NEW ENGLAND JOURNAL OF MEDICINE

Allergic sensitization is associated with rhinovirus-, but not other virus-, induced wheezing in children

(2010) T. Jartti et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Wheezing Rhinovirus Illnesses in Early Life Predict Asthma Development in High-Risk Children

(2008) Daniel J. Jackson et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Wheezing due to rhinovirus infection in infancy: Bronchial hyperresponsiveness at school age

(2008) Anne Kotaniemi-Syrjänen et al.   PEDIATRICS INTERNATIONAL