Nutrient and acetate amendment leads to acetoclastic methane production and microbial community change in a non-producing Australian coal well

The effect of coal rank on biogenic methane potential and microbial composition

(2016) Steven J. Robbins et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY

Methane production from coal by a single methanogen

(2016) D. Mayumi et al.   SCIENCE

Revising the Schizoparmaceae: Coniella and its synonyms Pilidiella and Schizoparme

(2016) L.V. Alvarez et al.   STUDIES IN MYCOLOGY

Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system

(2016) Daan R. Speth et al.   Nature Communications

High Frequency of Thermodesulfovibrio spp. and Anaerolineaceae in Association with Methanoculleus spp. in a Long-Term Incubation of n-Alkanes-Degrading Methanogenic Enrichment Culture

(2016) Bo Liang et al.   Frontiers in Microbiology

Metagenomic analysis of nitrogen and methane cycling in the Arabian Sea oxygen minimum zone

(2016) Claudia Lüke et al.   PeerJ

Substrate sources regulate spatial variation of metabolically active methanogens from two contrasting freshwater wetlands

(2015) Yongxin Lin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Ignored sediment fungal populations in water supply reservoirs are revealed by quantitative PCR and 454 pyrosequencing

(2015) Haihan Zhang et al.   BMC MICROBIOLOGY

Colonization of rice roots with methanogenic archaea controls photosynthesis-derived methane emission

(2015) Judith Pump et al.   ENVIRONMENTAL MICROBIOLOGY

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Anaerolineaceae and Methanosaeta turned to be the dominant microorganisms in alkanes-dependent methanogenic culture after long-term of incubation

(2015) Bo Liang et al.   AMB Express

Characterization of Novel Polycyclic Aromatic Hydrocarbon Dioxygenases from the Bacterial Metagenomic DNA of a Contaminated Soil

(2014) Angelina Chemerys et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Genomics of wood-degrading fungi

(2014) Robin A. Ohm et al.   FUNGAL GENETICS AND BIOLOGY

UniProt: a hub for protein information

(2014)   NUCLEIC ACIDS RESEARCH

Anaerobic Benzene Oxidation via Phenol in Geobacter metallireducens

(2013) Tian Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration

(2013) J. Denonfoux et al.   DNA RESEARCH

A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane

(2013) Amelia-Elena Rotaru et al.   Energy & Environmental Science

Differentiation between sediment and hypolimnion methanogen communities in humic lakes

(2013) Nicholas D. Youngblut et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal diversity from various marine habitats deduced through culture-independent studies

(2013) Cathrine Sumathi Manohar et al.   FEMS MICROBIOLOGY LETTERS

Heterologous Expression of Polycyclic Aromatic Hydrocarbon Ring-Hydroxylating Dioxygenase Genes from a Novel Pyrene-Degrading Betaproteobacterium

(2012) David R. Singleton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MacA is a Second Cytochrome c Peroxidase of Geobacter sulfurreducens

(2012) Julian Seidel et al.   BIOCHEMISTRY

Coalbed methane: A review

(2012) Tim A. Moore   INTERNATIONAL JOURNAL OF COAL GEOLOGY

Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat

(2012) Guillaume Borrel et al.   ISME Journal

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

(2012) D. Floudas et al.   SCIENCE

Trace Elements Affect Methanogenic Activity and Diversity in Enrichments from Subsurface Coal Bed Produced Water

(2012) Burcu Ünal et al.   Frontiers in Microbiology

Electron Donors Supporting Growth and Electroactivity of Geobacter sulfurreducens Anode Biofilms

(2011) Allison M. Speers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Combined Application of PCR-Based Functional Assays for the Detection of Aromatic-Compound-Degrading Anaerobes

(2011) Kevin Kuntze et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Generation of Multimillion-Sequence 16S rRNA Gene Libraries from Complex Microbial Communities by Assembling Paired-End Illumina Reads

(2011) Andrea K. Bartram et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Fungal diversity in anoxic-sulfidic sediments in a mangrove soil

(2011) Yonathan Arfi et al.   Fungal Ecology

Biogenic methane potential for Surat Basin, Queensland coal seams

(2011) Samuel L. Papendick et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY

A genetic system for Geobacter metallireducens: role of the flagellin and pilin in the reduction of Fe(III) oxide

(2011) Pier-Luc Tremblay et al.   Environmental Microbiology Reports

Potential for Direct Interspecies Electron Transfer in Methanogenic Wastewater Digester Aggregates

(2011) M. Morita et al.   mBio

EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data

(2011) Christopher S Miller et al.   GENOME BIOLOGY

Stimulation of Methane Generation from Nonproductive Coal by Addition of Nutrients or a Microbial Consortium

(2010) E. J. P. Jones et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evidence for syntrophic acetate oxidation coupled to hydrogenotrophic methanogenesis in the high-temperature petroleum reservoir of Yabase oil field (Japan)

(2010) Daisuke Mayumi et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial diversity of western Canadian subsurface coal beds and methanogenic coal enrichment cultures

(2010) Tara J. Penner et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY

Characterisation of a microbial community associated with a deep, coal seam methane reservoir in the Gippsland Basin, Australia

(2010) David J. Midgley et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY

Direct Exchange of Electrons Within Aggregates of an Evolved Syntrophic Coculture of Anaerobic Bacteria

(2010) Z. M. Summers et al.   SCIENCE

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens

(2009) Muktak Aklujkar et al.   BMC MICROBIOLOGY

Stable isotope and water quality analysis of coal bed methane production waters and gases from the Bowen Basin, Australia

(2009) E.C.P. Kinnon et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY

Methane-Producing Microbial Community in a Coal Bed of the Illinois Basin

(2008) D. Strapoc et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A survey of the microbial populations in some Australian coalbed methane reservoirs

(2008) Dongmei Li et al.   INTERNATIONAL JOURNAL OF COAL GEOLOGY