Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features

Probabilistic Modeling of Imaging, Genetics and Diagnosis

(2016) Nematollah K. Batmanghelich et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Brain Tumor Segmentation Using Convolutional Neural Networks in MRI Images

(2016) Sergio Pereira et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

NIMG-20. IMAGING PATTERN ANALYSIS REVEALS THREE DISTINCT PHENOTYPIC SUBTYPES OF GBM WITH DIFFERENT SURVIVAL RATES

(2016) Saima Rathore et al.   NEURO-ONCOLOGY

MPTH-02. EXTRACELLULAR EGFR289 ACTIVATING MUTATIONS CONFER POORER SURVIVAL AND SUGGEST ENHANCED MOTILITY IN PRIMARY GBMs

(2016) Zev Binder et al.   NEURO-ONCOLOGY

NIMG-11. HIGHLY-EXPRESSED WILD-TYPE EGFR AND EGFRvIII MUTANT GLIOBLASTOMAS HAVE SIMILAR MRI SIGNATURE, CONSISTENT WITH DEEP PERITUMORAL INFILTRATION

(2016) Spyridon Bakas et al.   NEURO-ONCOLOGY

MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection

(2016) Jimit Doshi et al.   NEUROIMAGE

Imaging Surrogates of Infiltration Obtained Via Multiparametric Imaging Pattern Analysis Predict Subsequent Location of Recurrence of Glioblastoma

(2016) Hamed Akbari et al.   NEUROSURGERY

Radiomics: Images Are More than Pictures, They Are Data

(2016) Robert J. Gillies et al.   RADIOLOGY

Population-based MRI atlases of spatial distribution are specific to patient and tumor characteristics in glioblastoma

(2016) Michel Bilello et al.   NeuroImage-Clinical

The Potential of Radiomic-Based Phenotyping in Precision Medicine

(2016) Hugo J. W. L. Aerts   JAMA Oncology

Automated Tumor Volumetry Using Computer-Aided Image Segmentation

(2015) Bilwaj Gaonkar et al.   ACADEMIC RADIOLOGY

T1-Weighted Dynamic Contrast-Enhanced MRI as a Noninvasive Biomarker of Epidermal Growth Factor Receptor vIII Status

(2015) J. Arevalo-Perez et al.   AMERICAN JOURNAL OF NEURORADIOLOGY

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)

(2015) Bjoern H. Menze et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Addition of MR imaging features and genetic biomarkers strengthens glioblastoma survival prediction in TCGA patients

(2015) Manal Nicolasjilwan et al.   JOURNAL OF NEURORADIOLOGY

Imaging patterns predict patient survival and molecular subtype in glioblastoma via machine learning techniques

(2015) Luke Macyszyn et al.   NEURO-ONCOLOGY

NIMG-05IDENTIFICATION OF IMAGING SIGNATURES OF THE EPIDERMAL GROWTH FACTOR RECEPTOR VARIANT III (EGFRvIII) IN GLIOBLASTOMA

(2015) Spyridon Bakas et al.   NEURO-ONCOLOGY

A radiomics model from joint FDG-PET and MRI texture features for the prediction of lung metastases in soft-tissue sarcomas of the extremities

(2015) M Vallières et al.   PHYSICS IN MEDICINE AND BIOLOGY

Magnetic resonance image features identify glioblastoma phenotypic subtypes with distinct molecular pathway activities

(2015) Haruka Itakura et al.   Science Translational Medicine

Semi-automated segmentation of pre-operative low grade gliomas in magnetic resonance imaging

(2015) Zeynettin Akkus et al.   CANCER IMAGING

Radiogenomics of glioblastoma: a window into its imaging and molecular variability

(2015) A Mahajan et al.   CANCER IMAGING

Fully automatic GBM segmentation in the TCGA-GBM dataset: Prognosis and correlation with VASARI features

(2015) Emmanuel Rios Velazquez et al.   Scientific Reports

Radiogenomics: What It Is and Why It Is Important

(2015) Maciej A. Mazurowski   Journal of the American College of Radiology

Multi-Parametric MRI and Texture Analysis to Visualize Spatial Histologic Heterogeneity and Tumor Extent in Glioblastoma

(2015) Leland S. Hu et al.   PLoS One

Radiogenomics and Imaging Phenotypes in Glioblastoma: Novel Observations and Correlation with Molecular Characteristics

(2014) Benjamin M. Ellingson   Current Neurology and Neuroscience Reports

Radiogenomics: Radiobiology Enters the Era of Big Data and Team Science

(2014) Barry S. Rosenstein et al.   INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS

Association of overall survival in patients with newly diagnosed glioblastoma with contrast-enhanced perfusion MRI: Comparison of intraindividually matched T1- and T2*-based bolus techniques

(2014) David Bonekamp et al.   JOURNAL OF MAGNETIC RESONANCE IMAGING

MRI-localized biopsies reveal subtype-specific differences in molecular and cellular composition at the margins of glioblastoma

(2014) B. J. Gill et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pattern Analysis of Dynamic Susceptibility Contrast-enhanced MR Imaging Demonstrates Peritumoral Tissue Heterogeneity

(2014) Hamed Akbari et al.   RADIOLOGY

Outcome Prediction in Patients with Glioblastoma by Using Imaging, Clinical, and Genomic Biomarkers: Focus on the Nonenhancing Component of the Tumor

(2014) Rajan Jain et al.   RADIOLOGY

Glioblastoma Multiforme: Exploratory Radiogenomic Analysis by Using Quantitative Image Features

(2014) Olivier Gevaert et al.   RADIOLOGY

Multi-Atlas Skull-Stripping

(2013) Jimit Doshi et al.   ACADEMIC RADIOLOGY

SHAPE AND TEXTURE INDEXES APPLICATION TO CELL NUCLEI CLASSIFICATION

(2013) GUILLAUME THIBAULT et al.   INTERNATIONAL JOURNAL OF PATTERN RECOGNITION AND ARTIFICIAL INTELLIGENCE

The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository

(2013) Kenneth Clark et al.   JOURNAL OF DIGITAL IMAGING

The Virtual Skeleton Database: An Open Access Repository for Biomedical Research and Collaboration

(2013) Michael Kistler et al.   JOURNAL OF MEDICAL INTERNET RESEARCH

Imaging descriptors improve the predictive power of survival models for glioblastoma patients

(2013) M. A. Mazurowski et al.   NEURO-ONCOLOGY

MR Imaging Predictors of Molecular Profile and Survival: Multi-institutional Study of the TCGA Glioblastoma Data Set

(2013) David A. Gutman et al.   RADIOLOGY

Do brain T2/FLAIR white matter hyperintensities correspond to myelin loss in normal aging? A radiologic-neuropathologic correlation study

(2013) Sven Haller et al.   Acta Neuropathologica Communications

Radiomics: Extracting more information from medical images using advanced feature analysis

(2012) Philippe Lambin et al.   EUROPEAN JOURNAL OF CANCER

GLISTR: Glioma Image Segmentation and Registration

(2012) A. Gooya et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Radiomics: the process and the challenges

(2012) Virendra Kumar et al.   MAGNETIC RESONANCE IMAGING

Use of magnetic perfusion-weighted imaging to determine epidermal growth factor receptor variant III expression in glioblastoma

(2012) Elana S. Tykocinski et al.   NEURO-ONCOLOGY

Imaging and Genomics: Is There a Synergy?

(2012) C. Carl Jaffe   RADIOLOGY

FSL

(2011) Mark Jenkinson et al.   NEUROIMAGE

N4ITK: Improved N3 Bias Correction

(2010) Nicholas J Tustison et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Deformable Registration of Glioma Images Using EM Algorithm and Diffusion Reaction Modeling

(2010) Ali Gooya et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Robust texture features for response monitoring of glioblastoma multiforme on T1-weighted and T2-FLAIR MR images: A preliminary investigation in terms of identification and segmentation

(2010) Dawit Assefa et al.   MEDICAL PHYSICS

Radiogenomics: Creating a link between molecular diagnostics and diagnostic imaging

(2009) Aaron M. Rutman et al.   EUROPEAN JOURNAL OF RADIOLOGY

The SRI24 multichannel atlas of normal adult human brain structure

(2009) Torsten Rohlfing et al.   HUMAN BRAIN MAPPING

Bayesian analysis of neuroimaging data in FSL

(2008) Mark W. Woolrich et al.   NEUROIMAGE

Brain–Tumor Interaction Biophysical Models for Medical Image Registration

(2008) Cosmina Hogea et al.   SIAM JOURNAL ON SCIENTIFIC COMPUTING