Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro
出版年份 2017 全文链接
标题
Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro
作者
关键词
Muscle, Genome organization, Development, Hi-C, Transcriptome
出版物
Skeletal Muscle
Volume 7, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-04-05
DOI
10.1186/s13395-017-0122-1
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming
- (2016) Jonathan A. Beagan et al. Cell Stem Cell
- Cell-of-Origin-Specific 3D Genome Structure Acquired during Somatic Cell Reprogramming
- (2016) Peter Hugo Lodewijk Krijger et al. Cell Stem Cell
- Topologically associated domains enriched for lineage-specific genes reveal expression-dependent nuclear topologies during myogenesis
- (2016) Daniel S. Neems et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- On TADs and LADs: Spatial Control Over Gene Expression
- (2016) Adriana Gonzalez-Sandoval et al. TRENDS IN GENETICS
- A diffusion model for the coordination of DNA replication in Schizosaccharomyces pombe
- (2016) T. Pichugina et al. Scientific Reports
- Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation
- (2015) J. Fraser et al. Molecular Systems Biology
- Chromatin architecture reorganization during stem cell differentiation
- (2015) Jesse R. Dixon et al. NATURE
- Tissue-specific expression of histone H3 variants diversified after species separation
- (2015) Kazumitsu Maehara et al. Epigenetics & Chromatin
- Global Reorganization of the Nuclear Landscape in Senescent Cells
- (2015) Tamir Chandra et al. Cell Reports
- Identification of alternative topological domains in chromatin
- (2014) Darya Filippova et al. Algorithms for Molecular Biology
- In This Issue
- (2014) CELL
- Replication-dependent histone genes are actively transcribed in differentiating and aging retinal neurons
- (2014) Abdul Rouf Banday et al. CELL CYCLE
- Every amino acid matters: essential contributions of histone variants to mammalian development and disease
- (2014) Ian Maze et al. NATURE REVIEWS GENETICS
- Chromosome conformation maps in fission yeast reveal cell cycle dependent sub nuclear structure
- (2014) Ralph S. Grand et al. NUCLEIC ACIDS RESEARCH
- Genome organization and long-range regulation of gene expression by enhancers
- (2013) Andrea Smallwood et al. CURRENT OPINION IN CELL BIOLOGY
- Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
- (2013) Takashi Nagano et al. NATURE
- Chromosome territories reposition during DNA damage-repair response
- (2013) Ishita S Mehta et al. GENOME BIOLOGY
- Three-Dimensional Folding and Functional Organization Principles of the Drosophila Genome
- (2012) Tom Sexton et al. CELL
- Extensive Promoter-Centered Chromatin Interactions Provide a Topological Basis for Transcription Regulation
- (2012) Guoliang Li et al. CELL
- Differential Effects of High-Temperature Stress on Nuclear Topology and Transcription of Repetitive Noncoding and Coding Rye Sequences
- (2012) D. Tomás et al. CYTOGENETIC AND GENOME RESEARCH
- Analysis of long-range chromatin interactions using Chromosome Conformation Capture
- (2012) Natalia Naumova et al. METHODS
- Topological domains in mammalian genomes identified by analysis of chromatin interactions
- (2012) Jesse R. Dixon et al. NATURE
- Spatial partitioning of the regulatory landscape of the X-inactivation centre
- (2012) Elphège P. Nora et al. NATURE
- Down-Regulation of Myogenin Can Reverse Terminal Muscle Cell Differentiation
- (2012) Nikolaos P. Mastroyiannopoulos et al. PLoS One
- Building Muscle: Molecular Regulation of Myogenesis
- (2012) C. F. Bentzinger et al. Cold Spring Harbor Perspectives in Biology
- DNA replication timing and long-range DNA interactions predict mutational landscapes of cancer genomes
- (2011) Subhajyoti De et al. NATURE BIOTECHNOLOGY
- ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity
- (2011) Matthew D. Young et al. NUCLEIC ACIDS RESEARCH
- Analysis of early C2C12 myogenesis identifies stably and differentially expressed transcriptional regulators whose knock-down inhibits myoblast differentiation
- (2011) Saravanan Rajan et al. PHYSIOLOGICAL GENOMICS
- Genome-wide remodeling of the epigenetic landscape during myogenic differentiation
- (2011) P. Asp et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Incorporation of Gemcitabine and Cytarabine into DNA by DNA Polymerase β and Ligase III/XRCC1
- (2010) A. S. Prakasha Gowda et al. BIOCHEMISTRY
- Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
- (2010) T. Ryba et al. GENOME RESEARCH
- Interaction between DNA Polymerase λ and Anticancer Nucleoside Analogs
- (2010) Miguel Garcia-Diaz et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
- (2010) Sven Heinz et al. MOLECULAR CELL
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Cell-type-specific long-range looping interactions identify distant regulatory elements of the CFTR gene
- (2010) Nele Gheldof et al. NUCLEIC ACIDS RESEARCH
- Chromosome Territories
- (2010) T. Cremer et al. Cold Spring Harbor Perspectives in Biology
- Rapid chromosome territory relocation by nuclear motor activity in response to serum removal in primary human fibroblasts
- (2010) Ishita S Mehta et al. GENOME BIOLOGY
- Global identification of yeast chromosome interactions using Genome conformation capture
- (2009) C.D.M. Rodley et al. FUNGAL GENETICS AND BIOLOGY
- Synaptic Activity Induces Dramatic Changes in the Geometry of the Cell Nucleus: Interplay between Nuclear Structure, Histone H3 Phosphorylation, and Nuclear Calcium Signaling
- (2009) M. Wittmann et al. JOURNAL OF NEUROSCIENCE
- An oestrogen-receptor-α-bound human chromatin interactome
- (2009) Melissa J. Fullwood et al. NATURE
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
- Exchange of GATA Factors Mediates Transitions in Looped Chromatin Organization at a Developmentally Regulated Gene Locus
- (2008) Huie Jing et al. MOLECULAR CELL
- Transcriptional repression mediated by repositioning of genes to the nuclear lamina
- (2008) K. L. Reddy et al. NATURE
- The genetics of vertebrate myogenesis
- (2008) Robert J. Bryson-Richardson et al. NATURE REVIEWS GENETICS
- Twist induces reversal of myotube formation
- (2007) Eleni Hjiantoniou et al. DIFFERENTIATION
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now