Recent urbanization in China is correlated with a Westernized microbiome encoding increased virulence and antibiotic resistance genes

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

(2016) Tommi Vatanen et al.   CELL

Diet-induced extinctions in the gut microbiota compound over generations

(2016) Erica D. Sonnenburg et al.   NATURE

Population-Based Regional Cancer Incidence in Korea: Comparison between Urban and Rural Areas

(2016) Haa-Na Song et al.   Cancer Research and Treatment

Comparative genomics of Fructobacillus spp. and Leuconostoc spp. reveals niche-specific evolution of Fructobacillus spp.

(2015) Akihito Endo et al.   BMC GENOMICS

Spatiotemporal variation in diabetes mortality in China: multilevel evidence from 2006 and 2012

(2015) Maigeng Zhou et al.   BMC PUBLIC HEALTH

The gut microbiota and host health: a new clinical frontier

(2015) Julian R Marchesi et al.   GUT

Impacts of Gut Bacteria on Human Health and Diseases

(2015) Yu-Jie Zhang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Obesity risk in rural, urban and rural-to-urban migrants: prospective results of the PERU MIGRANT study

(2015) R M Carrillo-Larco et al.   INTERNATIONAL JOURNAL OF OBESITY

A phylo-functional core of gut microbiota in healthy young Chinese cohorts across lifestyles, geography and ethnicities

(2015) Jiachao Zhang et al.   ISME Journal

Fat, fibre and cancer risk in African Americans and rural Africans

(2015) Stephen J. D. O’Keefe et al.   Nature Communications

Diversity in gut bacterial community of school-age children in Asia

(2015) Jiro Nakayama et al.   Scientific Reports

Archaea in and on the Human Body: Health Implications and Future Directions

(2015) Mor N. Lurie-Weinberger et al.   PLoS Pathogens

A prospective study of serum metabolites and colorectal cancer risk

(2014) Amanda J. Cross et al.   CANCER

The Microbiome in Inflammatory Bowel Disease: Current Status and the Future Ahead

(2014) Aleksandar D. Kostic et al.   GASTROENTEROLOGY

Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production

(2014) Gary D Wu et al.   GUT

Microbial genomic analysis reveals the essential role of inflammation in bacteria-induced colorectal cancer

(2014) Janelle C. Arthur et al.   Nature Communications

Kraken: ultrafast metagenomic sequence classification using exact alignments

(2014) Derrick E Wood et al.   GENOME BIOLOGY

The Comprehensive Antibiotic Resistance Database

(2013) Andrew G. McArthur et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation

(2013) Nicholas Arpaia et al.   NATURE

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Urbanisation and health in China

(2012) Peng Gong et al.   LANCET

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

HMDB 3.0—The Human Metabolome Database in 2013

(2012) David S. Wishart et al.   NUCLEIC ACIDS RESEARCH

Intestinal Inflammation Targets Cancer-Inducing Activity of the Microbiota

(2012) J. C. Arthur et al.   SCIENCE

Host-Gut Microbiota Metabolic Interactions

(2012) J. K. Nicholson et al.   SCIENCE

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

(2012) Sahar Abubucker et al.   PLoS Computational Biology

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

(2012) Xochitl C Morgan et al.   GENOME BIOLOGY

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

(2010) Alan W Walker et al.   ISME Journal

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The NIH Human Microbiome Project

(2009) et al.   GENOME RESEARCH

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE