Comparison of the gut microbiota composition between wild and captive sika deer (Cervus nippon hortulorum) from feces by high-throughput sequencing

Comparative Analysis of the Gut Microbial Communities in Forest and Alpine Musk Deer Using High-Throughput Sequencing

(2017) Xiaolong Hu et al.   Frontiers in Microbiology

Characterization of the gut microbiota in the golden takin (Budorcas taxicolor bedfordi)

(2017) Jun Chen et al.   AMB Express

Comparison of the fecal microbiota of dholes high-throughput Illumina sequencing of the V3–V4 region of the 16S rRNA gene

(2016) Xiaoyang Wu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Comparison of the bacterial communities in feces from wild versus housed sables (Martes zibellina) by high-throughput sequence analysis of the bacterial 16S rRNA gene

(2016) Yu Guan et al.   AMB Express

Diversity of Rumen Bacteria in Canadian Cervids

(2014) Robert J. Gruninger et al.   PLoS One

Molecular diversity of rumen bacterial communities from tannin-rich and fiber-rich forage fed domestic Sika deer (Cervus nippon) in China

(2013) Zhi Li et al.   BMC MICROBIOLOGY

Comparative Analysis of Microbial Profiles in Cow Rumen Fed with Different Dietary Fiber by Tagged 16S rRNA Gene Pyrosequencing

(2013) Honglada Thoetkiattikul et al.   CURRENT MICROBIOLOGY

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

Composition and Similarity of Bovine Rumen Microbiota across Individual Animals

(2012) Elie Jami et al.   PLoS One

Comparison of the Fecal Microbiota of Healthy Horses and Horses with Colitis by High Throughput Sequencing of the V3-V5 Region of the 16S rRNA Gene

(2012) Marcio C. Costa et al.   PLoS One

Evidence for Lignin Oxidation by the Giant Panda Fecal Microbiome

(2012) Wei Fang et al.   PLoS One

The Gut Microbiota

(2012) K. Mueller et al.   SCIENCE

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Analysis of the bacterial diversity in the fecal material of the endangered Yangtze finless porpoise, Neophocaena phocaenoides asiaeorientalis

(2011) Richard William McLaughlin et al.   MOLECULAR BIOLOGY REPORTS

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Characterization of Novel Bovine Gastrointestinal TractTreponemaIsolates and Comparison with Bovine Digital Dermatitis Treponemes

(2010) Nicholas J. Evans et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rumen Microbial Population Dynamics during Adaptation to a High-Grain Diet

(2010) S. C. Fernando et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ecological Characterisation of the Colonic Microbiota in Arctic and Sub-Arctic Seals

(2010) Trine Glad et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Phylogenetic Characterization of Fecal Microbial Communities of Dogs Fed Diets with or without Supplemental Dietary Fiber Using 454 Pyrosequencing

(2010) Ingmar S. Middelbos et al.   PLoS One

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age

(2009) D Mariat et al.   BMC MICROBIOLOGY

Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

(2009) Chenhong Zhang et al.   ISME Journal

Ureaplasma parvum or Mycoplasma hominis as Sole Pathogens Cause Chorioamnionitis, Preterm Delivery, and Fetal Pneumonia in Rhesus Macaques

(2009) Miles J. Novy et al.   Reproductive Sciences

Diet-Induced Obesity Is Linked to Marked but Reversible Alterations in the Mouse Distal Gut Microbiome

(2008) Peter J. Turnbaugh et al.   Cell Host & Microbe

Molecular characterization of the Cryptosporidium cervine genotype from a sika deer (Cervus nippon Temminck) in Zhengzhou, China and literature review

(2008) Rongjun Wang et al.   PARASITOLOGY RESEARCH