An improved method for predicting interactions between virus and human proteins

Issues in performance evaluation for host–pathogen protein interaction prediction

(2016) Wajid Arshad Abbasi et al.   Journal of Bioinformatics and Computational Biology

More challenges for machine-learning protein interactions

(2015) Tobias Hamp et al.   BIOINFORMATICS

Improving the Understanding of Pathogenesis of Human Papillomavirus 16 via Mapping Protein-Protein Interaction Network

(2015) Yongcheng Dong et al.   Biomed Research International

Predicting Protein-Protein Interactions from Primary Protein Sequences Using a Novel Multi-Scale Local Feature Representation Scheme and the Random Forest

(2015) Zhu-Hong You et al.   PLoS One

Stringent homology-based prediction of H. sapiens-M. tuberculosis H37Rv protein-protein interactions

(2014) Hufeng Zhou et al.   Biology Direct

Predicting protein–protein interactions between human and hepatitis C virus via an ensemble learning method

(2014) Abbasali Emamjomeh et al.   Molecular BioSystems

Human papillomavirus (HPV)-18 E6 oncoprotein interferes with the epithelial cell polarity Par3 protein

(2014) Florencia Facciuto et al.   Molecular Oncology

Prediction of Interactions between Viral and Host Proteins Using Supervised Machine Learning Methods

(2014) Ranjan Kumar Barman et al.   PLoS One

Stringent DDI-based Prediction of H. sapiens-M. tuberculosis H37Rv Protein-Protein Interactions

(2013) Hufeng Zhou et al.   BMC Systems Biology

Biochemical and Functional Interactions of Human Papillomavirus Proteins with Polycomb Group Proteins

(2013) Margaret McLaughlin-Drubin et al.   Viruses-Basel

Prediction of protein-protein interactions between viruses and human by an SVM model

(2012) Guangyu Cui et al.   BMC BIOINFORMATICS

A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition

(2012) Alok Sharma et al.   JOURNAL OF THEORETICAL BIOLOGY

Flaws in evaluation schemes for pair-input computational predictions

(2012) Yungki Park et al.   NATURE METHODS

LIBSVM

(2012) Chih-Chung Chang et al.   ACM Transactions on Intelligent Systems and Technology

PROGRESS IN COMPUTATIONAL STUDIES OF HOST–PATHOGEN INTERACTIONS

(2012) HUFENG ZHOU et al.   Journal of Bioinformatics and Computational Biology

VirHostNet: a knowledge base for the management and the analysis of proteome-wide virus–host interaction networks

(2008) Vincent Navratil et al.   NUCLEIC ACIDS RESEARCH

VirusMINT: a viral protein interaction database

(2008) A. Chatr-aryamontri et al.   NUCLEIC ACIDS RESEARCH