From the Surface to the Deep-Sea: Bacterial Distributions across Polymetallic Nodule Fields in the Clarion-Clipperton Zone of the Pacific Ocean

Production of Manganese Oxide Nanoparticles by Shewanella Species

(2016) Mitchell H. Wright et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments

(2016) Benjamin J. Tully et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Polymetallic nodules, sediments, and deep waters in the equatorial North Pacific exhibit highly diverse and distinct bacterial, archaeal, and microeukaryotic communities

(2016) Christine N. Shulse et al.   MicrobiologyOpen

Threatened by mining, polymetallic nodules are required to preserve abyssal epifauna

(2016) Ann Vanreusel et al.   Scientific Reports

Insights into the abundance and diversity of abyssal megafauna in a polymetallic-nodule region in the eastern Clarion-Clipperton Zone

(2016) Diva J. Amon et al.   Scientific Reports

Prokaryotic assemblages and metagenomes in pelagic zones of the South China Sea

(2015) Ching-Hung Tseng et al.   BMC GENOMICS

Manganese-Cycling Microbial Communities Inside Deep-Sea Manganese Nodules

(2015) Marco Blöthe et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Global diversity and biogeography of deep-sea pelagic prokaryotes

(2015) Guillem Salazar et al.   ISME Journal

Observations of carbon export by small sinking particles in the upper mesopelagic

(2015) Colleen A. Durkin et al.   MARINE CHEMISTRY

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Genomes of Planktonic Acidimicrobiales : Widening Horizons for Marine Actinobacteria by Metagenomics

(2015) Carolina Megumi Mizuno et al.   mBio

Transplant experiments uncover Baltic Sea basin-specific responses in bacterioplankton community composition and metabolic activities

(2015) Markus V. Lindh et al.   Frontiers in Microbiology

Abyssal foraminifera attached to polymetallic nodules from the eastern Clarion Clipperton Fracture Zone: a preliminary description and comparison with North Atlantic dropstone assemblages

(2015) Andrew J. Gooday et al.   Marine Biodiversity

DegePrime, a Program for Degenerate Primer Design for Broad-Taxonomic-Range PCR in Microbial Ecology Studies

(2014) Luisa W. Hugerth et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The influence of suboxic diagenesis on the formation of manganese nodules in the Clarion Clipperton nodule belt of the Pacific Ocean

(2014) Anna V. Wegorzewski et al.   MARINE GEOLOGY

Silicate deposition during decomposition of cyanobacteria may promote export of picophytoplankton to the deep ocean

(2014) Tiantian Tang et al.   Nature Communications

A comparison of microbial communities in deep-sea polymetallic nodules and the surrounding sediments in the Pacific Ocean

(2013) Yue-Hong Wu et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics

(2013) Cody S. Sheik et al.   ENVIRONMENTAL MICROBIOLOGY

Iron-Manganese Nodules Harbor Lower Bacterial Diversity and Greater Proportions ofProteobacteriaCompared to Bulk Soils in Four Locations Spanning from North to South China

(2013) Gui-You Zhang et al.   GEOMICROBIOLOGY JOURNAL

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Vertical Profiles of Bacteria in the Tropical and Subarctic Oceans Revealed by Pyrosequencing

(2013) Hongmei Jing et al.   PLoS One

From principles to practice: a spatial approach to systematic conservation planning in the deep sea

(2013) L. M. Wedding et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria

(2013) Rohit Ghai et al.   Scientific Reports

Microbial communities associated with ferromanganese nodules and the surrounding sediments

(2013) Benjamin J. Tully et al.   Frontiers in Microbiology

Elimination of Manganese(II,III) Oxidation in Pseudomonas putida GB-1 by a Double Knockout of Two Putative Multicopper Oxidase Genes

(2012) Kati Geszvain et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

The energy–diversity relationship of complex bacterial communities in Arctic deep-sea sediments

(2011) Christina Bienhold et al.   ISME Journal

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

(2011) Daniel PR Herlemann et al.   ISME Journal

Grazing of intertidal benthic foraminifera on bacteria: Assessment using pulse-chase radiotracing

(2011) M. Mojtahid et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function

(2011) John A. Fuerst et al.   NATURE REVIEWS MICROBIOLOGY

Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems

(2011) Lucie Zinger et al.   PLoS One

Spatial patterns of bacterial richness and evenness in the NW Mediterranean Sea explored by pyrosequencing of the 16S rRNA

(2010) T Pommier et al.   AQUATIC MICROBIAL ECOLOGY

Microbial community structure in the North Pacific ocean

(2009) Mark V Brown et al.   ISME Journal

Dispersal, survival and delayed growth of benthic foraminiferal propagules

(2009) Elisabeth Alve et al.   JOURNAL OF SEA RESEARCH

Molecular analyses reveal high levels of eukaryotic richness associated with enigmatic deep-sea protists (Komokiacea)

(2009) B. Lecroq et al.   Marine Biodiversity

Phylogenetic diversity of cyanobacterialnarBgenes from various marine habitats

(2008) Ryan W. Paerl et al.   ENVIRONMENTAL MICROBIOLOGY

Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000 m vertical profile in the North Pacific Subtropical Gyre

(2008) Vinh D. Pham et al.   ENVIRONMENTAL MICROBIOLOGY

Biogenic Origin of Polymetallic Nodules from the Clarion-Clipperton Zone in the Eastern Pacific Ocean: Electron Microscopic and EDX Evidence

(2008) Xiaohong Wang et al.   MARINE BIOTECHNOLOGY

Abyssal food limitation, ecosystem structure and climate change

(2008) C SMITH et al.   TRENDS IN ECOLOGY & EVOLUTION