Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points

Sugar Synthesis from CO2 in Escherichia coli

(2016) Niv Antonovsky et al.   CELL

Autocatalytic, bistable, oscillatory networks of biologically relevant organic reactions

(2016) Sergey N. Semenov et al.   NATURE

Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitrokcatmeasurements

(2016) Dan Davidi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The quantitative and condition-dependent Escherichia coli proteome

(2015) Alexander Schmidt et al.   NATURE BIOTECHNOLOGY

Pseudo-transition Analysis Identifies the Key Regulators of Dynamic Metabolic Adaptations from Steady-State Data

(2015) Luca Gerosa et al.   Cell Systems

Glycolytic strategy as a tradeoff between energy yield and protein cost

(2013) A. Flamholz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EcoCyc: fusing model organism databases with systems biology

(2012) Ingrid M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles

(2012) J. A. Raven et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

On the stability of metabolic cycles

(2010) Ed Reznik et al.   JOURNAL OF THEORETICAL BIOLOGY

Signatures of Arithmetic Simplicity in Metabolic Network Architecture

(2010) William J. Riehl et al.   PLoS Computational Biology

Computational identification of obligatorily autocatalytic replicators embedded in metabolic networks

(2008) Ádám Kun et al.   GENOME BIOLOGY