4.3 Article

Whole Genome Sequencing of the Braconid Parasitoid Wasp Fopius arisanus, an Important Biocontrol Agent of Pest Tepritid Fruit Flies

期刊

G3-GENES GENOMES GENETICS
卷 7, 期 8, 页码 2407-2411

出版社

OXFORD UNIV PRESS INC
DOI: 10.1534/g3.117.040741

关键词

whole genome sequencing; braconid wasp; tephritid fruit fly; biocontrol; Genome Report

资金

  1. USDA-ARS and USDA-Animal and Plant Health Inspection Service (APHIS) Farm Bill Section 10007 projects [3.0251.02, 3.0256.01, 3.0392.02]
  2. Science Department of Fujian province, China
  3. Science Department of Fujian province, China. S.B.S. was partially supported by USDA National Institute of Food and Agriculture (NIFA) Agriculture and Food Research Initiative (AFRI) Education and Literacy Initiative (ELI) [2017-67012-26087]
  4. Intramural Research Program of the National Institutes of Health (NIH), National Library of Medicine
  5. [2016N0002]

向作者/读者索取更多资源

The braconid wasp Fopius arisanus (Sonan) is an important biological control agent of tropical and subtropical pest fruit flies, including two important global pests, the Mediterranean fruit fly (Ceratitis capitata), and the oriental fruit fly (Bactrocera dorsalis). The goal of this study was to develop foundational genomic resources for this species to provide tools that can be used to answer questions exploring the multitrophic interactions between the host and parasitoid in this important research system. Here, we present a whole genome assembly of F. arisanus, derived from a pool of haploid offspring from a single unmated female. The genome is similar to 154 Mb in size, with a N50 contig and scaffold size of 51,867 bp and 0.98 Mb, respectively. Utilizing existing RNA-Seq data for this species, as well as publicly available peptide sequences from related Hymenoptera, a high quality gene annotation set, which includes 10,991 protein coding genes, was generated. Prior to this assembly submission, no RefSeq proteins were present for this species. Parasitic wasps play an important role in a diverse ecosystem as well as a role in biological control of agricultural pests. This whole genome assembly and annotation data represents the first genome-scale assembly for this species or any closely related Opiine, and are publicly available in the National Center for Biotechnology Information Genome and RefSeq databases, providing a much needed genomic resource for this hymenopteran group.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.3
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

暂无数据
暂无数据