Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals
出版年份 2017 全文链接
标题
Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals
作者
关键词
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出版物
Scientific Reports
Volume 7, Issue 1, Pages -
出版商
Springer Nature
发表日期
2017-12-08
DOI
10.1038/s41598-017-17484-x
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Sugar enrichment provides evidence for a role of nitrogen fixation in coral bleaching
- (2017) Claudia Pogoreutz et al. GLOBAL CHANGE BIOLOGY
- Biogeography and molecular diversity of coral symbionts in the genus Symbiodinium around the Arabian Peninsula
- (2017) Maren Ziegler et al. JOURNAL OF BIOGEOGRAPHY
- Global warming and recurrent mass bleaching of corals
- (2017) Terry P. Hughes et al. NATURE
- Bacterial community dynamics are linked to patterns of coral heat tolerance
- (2017) Maren Ziegler et al. Nature Communications
- Empty Niches after Extinctions Increase Population Sizes of Modern Corals
- (2016) Carlos Prada et al. CURRENT BIOLOGY
- Coral microbial community dynamics in response to anthropogenic impacts near a major city in the central Red Sea
- (2016) Maren Ziegler et al. MARINE POLLUTION BULLETIN
- The transcriptomic response of the coralAcropora digitiferato a competentSymbiodiniumstrain: the symbiosome as an arrested early phagosome
- (2016) A. R. Mohamed et al. MOLECULAR ECOLOGY
- Ancestral genetic diversity associated with the rapid spread of stress-tolerant coral symbionts in response to Holocene climate change
- (2016) Benjamin C. C. Hume et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Reefgenomics.Org - a repository for marine genomics data
- (2016) Yi Jin Liew et al. Database-The Journal of Biological Databases and Curation
- Comparative genomics explains the evolutionary success of reef-forming corals
- (2016) Debashish Bhattacharya et al. eLife
- Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes
- (2016) Kevin R. Theis et al. mSystems
- Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle
- (2016) M. Aranda et al. Scientific Reports
- Rapid Acclimation Ability Mediated by Transcriptome Changes in Reef-Building Corals
- (2015) Rachael A. Bay et al. Genome Biology and Evolution
- The role of transcriptome resilience in resistance of corals to bleaching
- (2015) Francois O. Seneca et al. MOLECULAR ECOLOGY
- The genome ofAiptasia, a sea anemone model for coral symbiosis
- (2015) Sebastian Baumgarten et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nitrogen cycling in corals: the key to understanding holobiont functioning?
- (2015) Nils Rädecker et al. TRENDS IN MICROBIOLOGY
- Projections of climate conditions that increase coral disease susceptibility and pathogen abundance and virulence
- (2015) Jeffrey Maynard et al. Nature Climate Change
- Bicarbonate transporters in corals point towards a key step in the evolution of cnidarian calcification
- (2015) Didier Zoccola et al. Scientific Reports
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- TIR-domain-containing protein repertoire of nine anthozoan species reveals coral–specific expansions and uncharacterized proteins
- (2014) Angela Z. Poole et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Structural Molecular Components of Septate Junctions in Cnidarians Point to the Origin of Epithelial Junctions in Eukaryotes
- (2014) Philippe Ganot et al. MOLECULAR BIOLOGY AND EVOLUTION
- InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic
- (2014) Erik L.L. Sonnhammer et al. NUCLEIC ACIDS RESEARCH
- Identification of MicroRNAs in the Coral Stylophora pistillata
- (2014) Yi Jin Liew et al. PLoS One
- The “Naked Coral” Hypothesis Revisited – Evidence for and Against Scleractinian Monophyly
- (2014) Marcelo V. Kitahara et al. PLoS One
- L_RNA_scaffolder: scaffolding genomes with transcripts
- (2013) Wei Xue et al. BMC GENOMICS
- Draft Assembly of the Symbiodinium minutum Nuclear Genome Reveals Dinoflagellate Gene Structure
- (2013) Eiichi Shoguchi et al. CURRENT BIOLOGY
- Gene expression under chronic heat stress in populations of the mustard hill coral (Porites astreoides ) from different thermal environments
- (2013) C. D. Kenkel et al. MOLECULAR ECOLOGY
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Genomic basis for coral resilience to climate change
- (2013) Daniel J. Barshis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Animals in a bacterial world, a new imperative for the life sciences
- (2013) Margaret McFall-Ngai et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- DNA barcoding reveals the coral “laboratory-rat”, Stylophora pistillata encompasses multiple identities
- (2013) Shashank Keshavmurthy et al. Scientific Reports
- Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
- (2013) Keith R Bradnam et al. GigaScience
- Cell Biology of Cnidarian-Dinoflagellate Symbiosis
- (2012) S. K. Davy et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- The Complex NOD-Like Receptor Repertoire of the Coral Acropora digitifera Includes Novel Domain Combinations
- (2012) Mayuko Hamada et al. MOLECULAR BIOLOGY AND EVOLUTION
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads
- (2012) Haibin Xu et al. PLoS One
- Toward almost closed genomes with GapFiller
- (2012) Marten Boetzer et al. GENOME BIOLOGY
- Quality control and preprocessing of metagenomic datasets
- (2011) R. Schmieder et al. BIOINFORMATICS
- EVOLUTIONARY DIVERSIFICATION OF REEF CORALS: A COMPARISON OF THE MOLECULAR AND FOSSIL RECORDS
- (2011) Carl Simpson et al. EVOLUTION
- Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record
- (2011) Eunji Park et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Using the Acropora digitifera genome to understand coral responses to environmental change
- (2011) Chuya Shinzato et al. NATURE
- The UniProt-GO Annotation database in 2011
- (2011) E. C. Dimmer et al. NUCLEIC ACIDS RESEARCH
- Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment
- (2011) Christian R. Voolstra et al. PLoS One
- Scaffolding pre-assembled contigs using SSPACE
- (2010) Marten Boetzer et al. BIOINFORMATICS
- Coral immunology and resistance to disease
- (2010) KC Reed et al. DISEASES OF AQUATIC ORGANISMS
- The dynamic genome of Hydra
- (2010) Jarrod A. Chapman et al. NATURE
- A Comprehensive Phylogenetic Analysis of the Scleractinia (Cnidaria, Anthozoa) Based on Mitochondrial CO1 Sequence Data
- (2010) Marcelo V. Kitahara et al. PLoS One
- High-quality draft assemblies of mammalian genomes from massively parallel sequence data
- (2010) S. Gnerre et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- More than just orphans: are taxonomically-restricted genes important in evolution?
- (2009) Konstantin Khalturin et al. TRENDS IN GENETICS
- Cloning and Use of a Coral 36B4 Gene to Study the Differential Expression of Coral Genes Between Light and Dark Conditions
- (2008) Aurélie Moya et al. MARINE BIOTECHNOLOGY
- Assessing the gene space in draft genomes
- (2008) Genis Parra et al. NUCLEIC ACIDS RESEARCH
- Mitochondrial and Nuclear Genes Suggest that Stony Corals Are Monophyletic but Most Families of Stony Corals Are Not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria)
- (2008) Hironobu Fukami et al. PLoS One
- One-Third of Reef-Building Corals Face Elevated Extinction Risk from Climate Change and Local Impacts
- (2008) K. E. Carpenter et al. SCIENCE
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