Article
Chemistry, Physical
August E. G. Mikkelsen, Jakob Schiotz, Tejs Vegge, Karsten W. Jacobsen
Summary: The study reveals that the water/Pt(111) interface is characterized by a double layer structure involving a primary strongly bound adsorption layer and a secondary weakly bound adsorption layer. There is effective repulsion between the adsorbed water molecules, resulting in a dynamically changing, semi-ordered interfacial structure.
JOURNAL OF CHEMICAL PHYSICS
(2021)
Article
Chemistry, Physical
Aditya Shankar Sandupatla, A. Prajwal Kumar, Swati Rana, Abhijit Chatterjee
Summary: This study investigates the catalytic activity of nanoporous gold (NPG) formed via dealloying/selective dissolution of the Au-Ag alloy for CO oxidation reaction (COR). The atomically resolved NPG structure is obtained by simulating the dealloying process, and the role of different catalytic sites in COR is evaluated. The results show that the rate-determining step is the binding and dissociation of O2 at the facet edge, where residual Ag facilitates O2 capture and subsequent dissociation on Au sites. Experimental evidence confirms the linear correlation between the normalized facet edge length of NPG and the turnover frequency.
Article
Chemistry, Physical
Jianhang Xu, Ruiyi Zhou, Zhen Tao, Christopher Malbon, Volker Blum, Sharon Hammes-Schiffer, Yosuke Kanai
Summary: The paper presents a strategy to implement the nuclear-electronic orbital (NEO) method for periodic electronic structure calculations, with a focus on multicomponent density functional theory. The NEO-DFT method is implemented using a combination of analytical and numerical integration techniques, as well as a resolution of the identity scheme. Proof-of-concept applications are provided to demonstrate the impact of quantized protons on the physical properties of extended systems.
JOURNAL OF CHEMICAL PHYSICS
(2022)
Article
Chemistry, Physical
Jitendra N. Tiwari, Muhammad Umer, Gokul Bhaskaran, Sohaib Umer, Geunsik Lee, Min Gyu Kim, Han-Koo Lee, Krishan Kumar, A. T. Ezhil Vilian, Yun Suk Huh, Young-Kyu Han
Summary: Progress in acidic water splitting has been limited by low oxygen evolution reaction (OER) activities, slow reaction kinetics, and catalyst degradation. In this study, t-phase ruthenium oxide atomic layers implanted on Mo2TiC2Tx MXene (RAL-M) were used as a model electrocatalyst for OER in acidic media, exhibiting remarkable mass activity and durability. Computational calculations reveal that RAL-M has strong affinity to oxygen species, enabling efficient water dissociation and accelerating the OER.
APPLIED CATALYSIS B-ENVIRONMENTAL
(2023)
Article
Chemistry, Physical
Keita Kobayashi, Akiko Yamaguchi, Masahiko Okumura
Summary: Machine learning molecular dynamics (MLMD) is a promising method for accurately predicting material properties with low computational costs. By utilizing machine learning potentials (MLPs), the structural and mechanical properties of materials can be evaluated and compared with other simulations and experimental results.
APPLIED CLAY SCIENCE
(2022)
Article
Chemistry, Physical
Mingming Luo, Chao Liu, Meiling Liu, Shaik Gouse Peera, Tongxiang Liang
Summary: This study systematically investigated the mechanism of CO oxidation on doped graphene catalysts through DFT calculations, finding that FeFe@C6, FeCo@C6, and FeNi@C6 are efficient for CO oxidation. Additionally, heteronuclear dimeric catalysts FeCo@C6 and FeNi@C6 exhibit better catalytic activity and lower energy barriers compared to homonuclear dimeric catalyst FeFe@C6.
APPLIED SURFACE SCIENCE
(2021)
Article
Crystallography
Daire O'Carroll, Niall J. English
Summary: In this article, the molecular dynamics analysis of systems containing TiO2 interfaces with water were presented using empirical forcefields (FF), Density-Functional Tight-Binding (DFTB), and Density-Functional Theory (DFT) methodologies. The results and differences between the methodologies were discussed in order to assess their suitability for molecular dynamics simulations of catalytic systems. Generally, well-parameterised forcefield MD outperforms the other methodologies, although it neglects certain qualitative behaviours entirely. DFTB represents an attractive compromise method, and has the potential to revolutionise the field of molecular dynamics in the near future due to advances in generating parameters.
Article
Chemistry, Physical
Paulina Maczugowska, Paulina Zawadzka, Krzysztof Halagan, Marcin Pastorczak, Joanna Sadlej, Marcin Kozanecki
Summary: In this study, water clusters formed in organic liquid matrices with different polarities were investigated using infrared absorption spectroscopy, Molecular Dynamics simulations, and Density Functional Theory calculations. The correlation between experiments and computations at a high level of accuracy was presented for the first time. The results revealed that a higher polarity of the organic matrix favored the formation of stable, small, and cyclic water clusters, while water molecules in nonpolar matrices tended to undergo phase separation on a macroscopic scale. The size of the water clusters strongly depended on the water content in the matrix.
JOURNAL OF MOLECULAR LIQUIDS
(2023)
Article
Multidisciplinary Sciences
Pablo M. Piaggi, Jack Weis, Athanassios Z. Panagiotopoulos, Pablo G. Debenedetti, Roberto Car
Summary: Molecular simulations based on machine-learning models and density-functional theory have provided insights into the mechanism of homogeneous ice nucleation. The results are in good agreement with experimental measurements, and the impact of factors such as thermodynamic driving force, interfacial free energy, and stacking disorder on nucleation rates has been studied.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2022)
Article
Chemistry, Physical
Jie Li, Qian Qin, Sinan Kardas, Mathieu Fossepre, Mathieu Surin, Antony E. Fernandes, Karine Glinel, Alain M. Jonas
Summary: The efficiency of cooperative catalysts is influenced by the probabilities of chance encounter between different catalytic units. Connecting these units along a short flexible oligomeric chain increases these probabilities. The sequence position of a catalytic triad along a flexible backbone also plays a significant role, as interchanging two groups in the oligomer sequence can lead to a magnitude change in catalytic activity. Molecular graphs computed from molecular dynamics simulations provide insights into the dependence of functional connections between catalytic groups on sequence order.
Article
Chemistry, Applied
Xiangyou Kong, Jinyang Zhao, Kai Huo, Ling Shi, Zhenhua Yao, Jianan Yang, Maocong Hu, Xia Li, Xuguang Liu
Summary: This study demonstrated the significant effects of alkali metal cations on the synthesis and properties of ZSM-11 zeolites, with Li+ ion having a smaller impact on synthesis efficiency and acidity compared to other ions. DFT calculations and MD simulations provided insights into the precursor reactions and polycondensation of silicon and aluminum units. The obtained ZSM-11 samples showed distinct catalytic performance, attributed to their different structure and acidity properties.
MICROPOROUS AND MESOPOROUS MATERIALS
(2023)
Article
Chemistry, Physical
Di Zhang, Yizhang Li, Yufeng Huang, Zuoguang Zhao, Zhijun Zhang
Summary: This study investigated the adsorption behavior of CPAM, NPAM, and APAM on the kaolinite (001) surface using MD simulations and DFT calculations. Results showed differences in adsorption strength and hydrogen bonding ability among the polymers, with electrostatic interactions being the main driving force for adsorption. The simulation results were in good agreement with experimental data.
APPLIED SURFACE SCIENCE
(2022)
Article
Chemistry, Physical
Shuang Li, Bingbing Chen, Yi Wang, Meng-Yang Ye, Peter A. van Aken, Chong Cheng, Arne Thomas
Summary: The study demonstrates stabilizing single-atom catalysts on tungsten carbides for efficient oxygen evolution reaction, achieving low overpotential and high turnover frequency due to the unique structure of tungsten carbides. The application of inexpensive and durable WCx supports opens up a promising pathway to develop further single-atom catalysts for electrochemical catalytic reactions.
Article
Chemistry, Multidisciplinary
Jan Paul Menzel, Martijn Kloppenburg, Jelena Belic, Huub J. M. de Groot, Lucas Visscher, Francesco Buda
Summary: The computational study and workflow of photocatalytic water oxidation processes have been investigated, proposing a cost-efficient method combining GFN-xTB and DFT for reliable assessment of WOC properties.
JOURNAL OF COMPUTATIONAL CHEMISTRY
(2021)
Article
Chemistry, Physical
Debora A. C. da Silva, Antenor J. Paulista Neto, Aline M. Pascon, Eudes E. Fileti, Leonardo R. C. Fonseca, Hudson G. Zanin
Summary: The study demonstrates that in aqueous-based supercapacitors, the double-layer capacitance plays a significant role in the total differential capacitance. A symmetric supercapacitor assembled with hydroxyl-functionalized graphene electrodes shows higher double-layer capacitance and better performance in energy storage.
JOURNAL OF PHYSICAL CHEMISTRY C
(2021)
Article
Chemistry, Multidisciplinary
Yue Fu, Leonardo Bernasconi, Peng Liu
Summary: This computational approach utilizes AIMD simulations to evaluate glycosylation reaction mechanisms, providing complementary indicators such as free energy profiles, synchronicity of transition state structures, and time gaps to describe and predict glycosylation mechanisms accurately.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2021)
Review
Chemistry, Multidisciplinary
Franco Scalambra, Silvia Imberti, Nicole Holzmann, Leonardo Bernasconi, Antonio Romerosa
Summary: Neutron scattering combined with ab initio calculations is a powerful tool for studying metal complexes in different solvents, especially in water, providing detailed models of reaction paths and molecular-level observations of the influence of solvent molecules on catalytic processes.
Article
Chemistry, Inorganic & Nuclear
Diego Sorbelli, Leonardo Belpassi, Paola Belanzoni
Summary: This study elucidates the unconventional reactivity of anionic aluminum(I) anions at coordinated metal sites and the influence of the gold-aluminum bond on its efficiency. The investigation provides new insights into the special role of aluminum in these hetero-binuclear compounds and their reactivity towards carbon dioxide.
INORGANIC CHEMISTRY
(2022)
Article
Physics, Multidisciplinary
Jian Wang, Evert Jan Baerends
Summary: A self-consistent field method based on density matrix functional theory is proposed, which reduces the computational cost while maintaining the accuracy compared to sophisticated configuration interaction based methods. This method effectively includes both weak or breaking bond nondynamical correlation and dynamical correlation at all distances in a single scheme. It is well suited for large-scale potential energy surface calculation and molecular dynamics simulation.
PHYSICAL REVIEW LETTERS
(2022)
Article
Chemistry, Inorganic & Nuclear
Diego Sorbelli, Elisa Rossi, Remco W. A. Havenith, Johannes E. M. N. Klein, Leonardo Belpassi, Paola Belanzoni
Summary: The study investigates the properties and influencing factors of the reactions between gold-aluminyl and gold-boryl complexes with CO2. The results show that the gold-aluminyl and gold-boryl bonds have similar electron-sharing properties, with the gold-boryl bond being slightly more polarized, resulting in lower radical reactivity. Under the influence of ligands, aluminyl products are favored over boryl products, and the gold ancillary ligand has minimal impact on the formation and stability of the reaction products, while carbene ligands are slightly better than phosphine ligands. Furthermore, the steric hindrance at the carbene ligand site plays an important role in the formation of the reaction product.
INORGANIC CHEMISTRY
(2022)
Article
Chemistry, Physical
Sara Giarrusso, Roeland Neugarten, Evert Jan Baerends, Klaas J. H. Giesbertz
Summary: In this study, we consider a prototypical 1D model Hamiltonian for a stretched heteronuclear molecule and investigate the characteristics of its individual components. We find that these components exhibit peaks and steps in regions with very low density. By analyzing an analytical model, we explain the underlying mechanism behind these characteristics and evaluate the validity of the model at large but finite internuclear distance.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
(2022)
Article
Chemistry, Multidisciplinary
Diego Sorbelli, Leonardo Belpassi, Paola Belanzoni
Summary: The reactivity of gold-aluminyl complexes towards water, ammonia, sulfur dioxide and nitrous oxide has been computationally explored. The results suggest that the activation processes with each substrate are experimentally feasible due to the presence of the electron-sharing gold-aluminyl bond. The study also reveals the potential of [(Bu3PAuAl)-Bu-t(NON)] complex as an efficient catalyst towards N2O reduction.
CHEMISTRY-A EUROPEAN JOURNAL
(2023)
Article
Chemistry, Inorganic & Nuclear
Isaac F. Leach, Diego Sorbelli, Leonardo Belpassi, Paola Belanzoni, Remco W. A. Havenith, Johannes E. M. N. Klein
Summary: Nucleophilic formal gold(-i) and gold(i) complexes were investigated using density functional theory calculations and multiconfigurational calculations. The study found that gold(0) centers form electron-sharing bonds with Al- and B-based ligands, highlighting the discrepancy between electronic structures and the concept of oxidation states.
DALTON TRANSACTIONS
(2022)
Article
Chemistry, Inorganic & Nuclear
Diego Sorbelli, Leonardo Belpassi, Paola Belanzoni
Summary: This study computationally elucidates the mechanism of the insertion reaction of 3-hexyne into Cu-Al and Au-Al bonds in M-aluminyl complexes (M = Cu, Au). It reveals a radical-like mechanism with Cu-Al and Au-Al bonds acting as nucleophiles and predicts a less efficient reactivity for the gold-aluminyl complex. The study also demonstrates that the reduced reactivity at the gold site is due to the relativistic lowering of the 6s Au orbital, resulting in a less nucleophilic Au-Al bond. These findings indicate the importance of the unconventional electronic structure and electron-sharing nature of the M-Al bond in coinage metal complexes.
INORGANIC CHEMISTRY
(2022)
Article
Chemistry, Multidisciplinary
Diego Sorbelli, Leonardo Belpassi, Paola Belanzoni
Summary: The study reports the unprecedented reactivity of coinage metal-aluminyl complexes with dihydrogen. Similar to group 14 dimetallenes and dimetallynes, these complexes are predicted to activate H-2 under mild conditions. Two different reaction pathways are found, revealing a common driving force - the nucleophilic behavior of the electron-sharing M-Al (M = Cu, Ag, Au) bond, enabling a cooperative and diradical-like mechanism. This mode of chemical reactivity emerges as a new paradigm for dihydrogen activation and calls for experimental feedback.
Article
Chemistry, Multidisciplinary
Hui Zhou, Roberta Properzi, Markus Leutzsch, Paola Belanzoni, Giovanni Bistoni, Nobuya Tsuji, Jung Tae Han, Chendan Zhu, Benjamin List
Summary: Chiral organosilanes are not naturally occurring and are therefore rare. However, a new synthetic approach using racemic silanes as starting materials has been developed, which expands the range of accessible Si-stereogenic compounds. This approach involves the use of strong and confined imidodiphosphorimidate (IDPi) catalysts to enable the dynamic kinetic asymmetric transformation (DYKAT) of racemic allyl silanes, leading to the formation of Si-stereogenic silyl ethers. The products can be easily converted into enantiopure monohydrosilanes. A proposed mechanism involves the epimerization of a catalyst-bound intermediate.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2023)
Article
Chemistry, Inorganic & Nuclear
Jacopo Segato, Eleonora Aneggi, Walter Baratta, Filippo Campagnolo, Leonardo Belpassi, Paola Belanzoni, Daniele Zuccaccia
Summary: The ion pairing structure of gold(III) catalysts during the hydration of alkynes has been determined through experimental and theoretical analysis. The choice of ligands can control the position of the counterion, affecting the reaction.
Article
Chemistry, Physical
Andrew M. Teale, Trygve Helgaker, Andreas Savin, Carlo Adamo, Balint Aradi, Alexei Arbuznikov, Paul W. Ayers, Evert Jan Baerends, Vincenzo Barone, Patrizia Calaminici, Eric Cances, Emily A. Carter, Pratim Kumar Chattaraj, Henry Chermette, Ilaria Ciofini, T. Daniel Crawford, Frank De Proft, John F. Dobson, Claudia Draxl, Thomas Frauenheim, Emmanuel Fromager, Patricio Fuentealba, Laura Gagliardi, Giulia Galli, Jiali Gao, Paul Geerlings, Nikitas Gidopoulos, Peter M. W. Gill, Paola Gori-Giorgi, Andreas Gorling, Tim Gould, Stefan Grimme, Oleg Gritsenko, Hans Jorgen Aagaard Jensen, Erin R. Johnson, Robert O. Jones, Martin Kaupp, Andreas M. Koster, Leeor Kronik, Anna Krylov, Simen Kvaal, Andre Laestadius, Mel Levy, Mathieu Lewin, Shubin Liu, Pierre-Francois Loos, Neepa T. Maitra, Frank Neese, John P. Perdew, Katarzyna Pernal, Pascal Pernot, Piotr Piecuch, Elisa Rebolini, Lucia Reining, Pina Romaniello, Adrienn Ruzsinszky, Dennis R. Salahub, Matthias Scheffler, Peter Schwerdtfeger, Viktor N. Staroverov, Jianwei Sun, Erik Tellgren, David J. Tozer, Samuel B. Trickey, Carsten A. Ullrich, Alberto Vela, Giovanni Vignale, Tomasz A. Wesolowski, Xin Xu, Weitao Yang
Summary: This paper provides an informal review and discussion on the history, present status, and future of density-functional theory (DFT) by 70 workers in the field. The format of a roundtable discussion allowed participants to express their views through 302 individual contributions to a preset list of 26 questions. Supported by a bibliography of 777 entries, the paper offers a comprehensive snapshot of DFT in 2022.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
(2022)
Article
Chemistry, Physical
E. J. Baerends
Summary: The translated article discusses the concept of the chemical potential of electrons in an atom or molecule in the density functional theory. It points out that the chemical potential cannot be defined in few-electron systems because they lack important characteristics of thermodynamic systems. The article also critically reviews some issues in density functional theory.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS
(2022)
Article
Chemistry, Multidisciplinary
Diego Sorbelli, Leonardo Belpassi, Paola Belanzoni
Summary: This work systematically studied the electronic structure and reactivity of Au-Al complexes with different aluminyl scaffolds, comparing them to carbene analogues. The results reveal that aluminyls and carbenes exhibit different behavior when bound to gold, with aluminyls forming an electron-sharing and weakly polarized Au-Al bond. The poor modulability of their electronic structure and bond nature is reflected in the similar reaction mechanisms of gold-aluminyl complexes towards CO2.