Marine origin of retroviruses in the early Palaeozoic Era

Time-Dependent Rate Phenomenon in Viruses

(2016) Pakorn Aiewsakun et al.   JOURNAL OF VIROLOGY

Time dependency of foamy virus evolutionary rate estimates

(2015) Pakorn Aiewsakun et al.   BMC EVOLUTIONARY BIOLOGY

Uncertainty in the Timing of Origin of Animals and the Limits of Precision in Molecular Timescales

(2015) Mario dos Reis et al.   CURRENT BIOLOGY

Endogenous viruses: Connecting recent and ancient viral evolution

(2015) Pakorn Aiewsakun et al.   VIROLOGY

Selecting optimal partitioning schemes for phylogenomic datasets

(2014) Robert Lanfear et al.   BMC EVOLUTIONARY BIOLOGY

The impact of calibration and clock-model choice on molecular estimates of divergence times

(2014) Sebastián Duchêne et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Endogenous Viral Sequences from the Cape Golden Mole (Chrysochloris asiatica) Reveal the Presence of Foamy Viruses in All Major Placental Mammal Clades

(2014) Guan-Zhu Han et al.   PLoS One

Pan-vertebrate comparative genomics unmasks retrovirus macroevolution

(2014) Alexander Hayward et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates

(2014) S. Duchene et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution

(2014) Aris Katzourakis et al.   Retrovirology

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome of the platyfish, Xiphophorus maculatus, provides insights into evolutionary adaptation and several complex traits

(2013) Manfred Schartl et al.   NATURE GENETICS

Identification of an ancient endogenous retrovirus, predating the divergence of the placental mammals

(2013) A. Lee et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Interrelationships of basal synapsids: cranial and postcranial morphological partitions suggest different topologies

(2012) Roger B. J. Benson   JOURNAL OF SYSTEMATIC PALAEONTOLOGY

An Endogenous Foamy Virus in the Aye-Aye (Daubentonia madagascariensis)

(2012) G.-Z. Han et al.   JOURNAL OF VIROLOGY

An Endogenous Foamy-like Viral Element in the Coelacanth Genome

(2012) Guan-Zhu Han et al.   PLoS Pathogens

Paleozoic origin of insect large dsDNA viruses

(2011) J. Theze et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Molecular Phylogeny of Living Primates

(2011) Polina Perelman et al.   PLoS Genetics

Jane: a new tool for the cophylogeny reconstruction problem

(2010) Chris Conow et al.   Algorithms for Molecular Biology

DNA Transposons: Nature and Applications in Genomics

(2010) Martin Munoz-Lopez et al.   CURRENT GENOMICS

More reliable estimates of divergence times in Pan using complete mtDNA sequences and accounting for population structure

(2010) A. C. Stone et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Network dynamics of eukaryotic LTR retroelements beyond phylogenetic trees

(2009) Carlos Llorens et al.   Biology Direct

On the Estimation of the Insertion Time of LTR Retrotransposable Elements

(2009) T.E. Kijima et al.   MOLECULAR BIOLOGY AND EVOLUTION

Macroevolution of Complex Retroviruses

(2009) A. Katzourakis et al.   SCIENCE

Phylogeny and biogeography of the family Salamandridae (Amphibia: Caudata) inferred from complete mitochondrial genomes

(2008) Peng Zhang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

Phylogeny of the Cyprinodontiformes (Teleostei, Atherinomorpha): the contribution of cranial soft tissue characters

(2008) Stefan T. Hertwig   ZOOLOGICA SCRIPTA