Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications

Mapping QTLs for submergence tolerance in rice using a population fixed for SUB1A tolerant allele

(2017) Zennia Jean C. Gonzaga et al.   MOLECULAR BREEDING

Identification of QTLs for yield and agronomic traits in rice under stagnant flooding conditions

(2017) Anshuman Singh et al.   Rice

Exploring novel genetic sources of salinity tolerance in rice through molecular and physiological characterization

(2016) M. Akhlasur Rahman et al.   ANNALS OF BOTANY

SNP-based discovery of salinity-tolerant QTLs in a bi-parental population of rice (Oryza sativa)

(2016) D. R. Gimhani et al.   MOLECULAR GENETICS AND GENOMICS

Open access resources for genome-wide association mapping in rice

(2016) Susan R. McCouch et al.   Nature Communications

Identifying and confirming quantitative trait loci associated with heat tolerance at flowering stage in different rice populations

(2015) Changrong Ye et al.   BMC GENETICS

Genetic diversity analysis of Pakistan rice (Oryza sativa) germplasm using multiplexed single nucleotide polymorphism markers

(2015) Shahid Masood Shah et al.   GENETIC RESOURCES AND CROP EVOLUTION

Single-copy gene based 50 K SNP chip for genetic studies and molecular breeding in rice

(2015) Nisha Singh et al.   Scientific Reports

Harvesting the Promising Fruits of Genomics: Applying Genome Sequencing Technologies to Crop Breeding

(2014) Rajeev K. Varshney et al.   PLOS BIOLOGY

Development of genomics-based genotyping platforms and their applications in rice breeding

(2013) Haodong Chen et al.   CURRENT OPINION IN PLANT BIOLOGY

Single nucleotide polymorphism genotyping using Kompetitive Allele Specific PCR (KASP): overview of the technology and its application in crop improvement

(2013) Kassa Semagn et al.   MOLECULAR BREEDING

A High-Density SNP Genotyping Array for Rice Biology and Molecular Breeding

(2013) Haodong Chen et al.   Molecular Plant

A whole-genome SNP array (RICE6K) for genomic breeding in rice

(2013) Huihui Yu et al.   PLANT BIOTECHNOLOGY JOURNAL

Sequence-Based Genotyping for Marker Discovery and Co-Dominant Scoring in Germplasm and Populations

(2012) Hoa T. Truong et al.   PLoS One

Core single-nucleotide polymorphisms—a tool for genetic analysis of the Japanese rice population

(2011) Hideki Nagasaki et al.   BREEDING SCIENCE

Development of genome-wide SNP assays for rice

(2011) Susan R. McCouch et al.   BREEDING SCIENCE

High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform

(2011) Michael J. Thomson et al.   MOLECULAR BREEDING

Mapping QTL for heat tolerance at flowering stage in rice using SNP markers

(2011) Changrong Ye et al.   PLANT BREEDING

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Development and application of a set of breeder-friendly SNP markers for genetic analyses and molecular breeding of rice (Oryza sativa L.)

(2011) Haodong Chen et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Development of a Research Platform for Dissecting Phenotype–Genotype Associations in Rice (Oryza spp.)

(2010) Chih-Wei Tung et al.   Rice

A benefit of high temperature: increased effectiveness of a rice bacterial blight disease resistance gene

(2009) K. M. Webb et al.   NEW PHYTOLOGIST

Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond

(2008) Endang M. Septiningsih et al.   ANNALS OF BOTANY

High-resolution mapping and gene prediction of Xanthomonas Oryzae pv. Oryzae resistance gene Xa7

(2008) Shen Chen et al.   MOLECULAR BREEDING

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One