期刊
WORLD JOURNAL OF GASTROENTEROLOGY
卷 23, 期 25, 页码 4624-4631出版社
BAISHIDENG PUBLISHING GROUP INC
DOI: 10.3748/wjg.v23.i25.4624
关键词
Ulcerative colitis; Patients; Healthy partner; Fecal microbial communities; Microbiota dysbiosis
资金
- Lishui Science and Technology Bureau Research Fund [2013JYZB43]
- Medical and Health Science and Technology Plan Project of Zhejiang Province [2015KYB371]
AIM To investigate alterations in the fecal microbiome using 16S rRNA amplicon sequencing in couples in the same cohabitation environment. METHODS Fecal samples were collected from eight ulcerative colitis (UC) patients and their healthy partners at Lishui People's Hospital, Zhejiang Province, China. DNA was extracted and the variable regions V3 and V4 of the 16S rRNA genes were PCR amplified using a two-step protocol. Clear reads were clustered into operational taxonomic units (OTUs) at the 97% sequence similarity level using UCLUST v1.2.22. The Wilcoxon rank-sum test (R v3.1.2) was used to compare inter- individual differences. Differences with a P value < 0.05 were considered statistically significant. RESULTS Fecal microbial communities were more similar among UC patients than their healthy partners (P = 0.024). UC individuals had a lower relative abundance of bacteria belonging to the Firmicutes, especially Blautia, Clostridium, Coprococcus and Roseburia (P < 0.05). Microbiota dysbiosis was detected in UC patients and their healthy partners. Relevant genera included Akkermansiam, Bacteroides, Escherichia, Lactobacillales, Klebsiella and Parabacteroides. The enriched pathways in fecal samples of UC patients were related to lipid and nucleotide metabolism. Additionally, the pathways involved in membrane transport and metabolism of cofactors and vitamins were more abundant in the healthy partners. CONCLUSION Our results suggested that the microbial composition might be affected in healthy partners cohabiting with UC patients, especially in terms of microbiota dysbiosis.
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