An innovative procedure of genome-wide association analysis fits studies on germplasm population and plant breeding

Detecting the QTL-allele system conferring flowering date in a nested association mapping population of soybean using a novel procedure

(2017) Shuguang Li et al.   THEORETICAL AND APPLIED GENETICS

Needles: Toward Large-Scale Genomic Prediction with Marker-by-Environment Interaction

(2016) Arne De Coninck et al.   GENETICS

Increased Proportion of Variance Explained and Prediction Accuracy of Survival of Breast Cancer Patients with Use of Whole-Genome Multiomic Profiles

(2016) A. I. Vazquez et al.   GENETICS

Detecting the QTL-allele system of seed isoflavone content in Chinese soybean landrace population for optimal cross design and gene system exploration

(2016) Shan Meng et al.   THEORETICAL AND APPLIED GENETICS

Needles: Toward Large-Scale Genomic Prediction with Marker-by-Environment Interaction

(2016) Arne De Coninck et al.   GENETICS

Improving power and accuracy of genome-wide association studies via a multi-locus mixed linear model methodology

(2016) Shi-Bo Wang et al.   Scientific Reports

PopVar: A Genome-Wide Procedure for Predicting Genetic Variance and Correlated Response in Biparental Breeding Populations

(2015) Mohsen Mohammadi et al.   CROP SCIENCE

Modeling Epistasis in Genomic Selection

(2015) Yong Jiang et al.   GENETICS

Establishment of a 100-seed weight quantitative trait locus–allele matrix of the germplasm population for optimal recombination design in soybean breeding programmes

(2015) Yinghu Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

Marker-assisted breeding for transgressive seed protein content in soybean [Glycine max (L.) Merr.]

(2015) Ying Hu Zhang et al.   THEORETICAL AND APPLIED GENETICS

Modeling Epistasis in Genomic Selection

(2015) Yong Jiang et al.   GENETICS

Genome-wide association study (GWAS) of carbon isotope ratio (δ13C) in diverse soybean [Glycine max (L.) Merr.] genotypes

(2014) Arun Prabhu Dhanapal et al.   THEORETICAL AND APPLIED GENETICS

Genomic selection: genome-wide prediction in plant improvement

(2014) Zeratsion Abera Desta et al.   TRENDS IN PLANT SCIENCE

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica)

(2013) Guanqing Jia et al.   NATURE GENETICS

Does genomic selection have a future in plant breeding?

(2013) Elisabeth Jonas et al.   TRENDS IN BIOTECHNOLOGY

A Lasso multi-marker mixed model for association mapping with population structure correction

(2012) Barbara Rakitsch et al.   BIOINFORMATICS

Back to Basics for Bayesian Model Building in Genomic Selection

(2012) Hanni P. Kärkkäinen et al.   GENETICS

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations

(2012) Vincent Segura et al.   NATURE GENETICS

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Overview of LASSO-related penalized regression methods for quantitative trait mapping and genomic selection

(2012) Zitong Li et al.   THEORETICAL AND APPLIED GENETICS

Multiplexed shotgun genotyping for rapid and efficient genetic mapping

(2011) P. Andolfatto et al.   GENOME RESEARCH

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

(2010) Susanna Atwell et al.   NATURE

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Linkage Disequilibrium and Association Mapping

(2008) B.S. Weir   Annual Review of Genomics and Human Genetics

Haplotype block partitioning as a tool for dimensionality reduction in SNP association studies

(2008) Cristian Pattaro et al.   BMC GENOMICS

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Next-generation genetics in plants

(2008) Magnus Nordborg et al.   NATURE

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One