Transgenerational function ofTetrahymenaPiwi protein Twi8p at distinctive noncoding RNA loci

piRNAs and their diverse roles: a transposable element-driven tactic for gene regulation?

(2017) Arpita Sarkar et al.   FASEB JOURNAL

RISC assembly: Coordination between small RNAs and Argonaute proteins

(2016) Hotaka Kobayashi et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools

(2016) Marisa D. Ruehle et al.   GENETICS

Phosphorylation of an HP1-like protein is a prerequisite for heterochromatin body formation inTetrahymenaDNA elimination

(2016) Kensuke Kataoka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Anatomy of RISC: how do small RNAs and chaperones activate Argonaute proteins?

(2016) Kotaro Nakanishi   Wiley Interdisciplinary Reviews-RNA

Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools

(2016) Marisa D. Ruehle et al.   GENETICS

PIWI-Interacting RNA: Its Biogenesis and Functions

(2015) Yuka W. Iwasaki et al.   Annual Review of Biochemistry

Small-RNA-Mediated Genome-wide trans -Recognition Network in Tetrahymena DNA Elimination

(2015) Tomoko Noto et al.   MOLECULAR CELL

RNA-mediated epigenetic regulation of gene expression

(2015) Daniel Holoch et al.   NATURE REVIEWS GENETICS

Towards a molecular understanding of microRNA-mediated gene silencing

(2015) Stefanie Jonas et al.   NATURE REVIEWS GENETICS

From guide to target: molecular insights into eukaryotic RNA-interference machinery

(2015) Jonathan J Ipsaro et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

From guide to target: molecular insights into eukaryotic RNA-interference machinery

(2015) Jonathan J Ipsaro et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

RNA-based regulation of transposon expression

(2015) Daniel Gebert et al.   Wiley Interdisciplinary Reviews-RNA

piRNAs: from biogenesis to function

(2014) E.-M. Weick et al.   DEVELOPMENT

Tetrahymena Pot2 Is a Developmentally Regulated Paralog of Pot1 That Localizes to Chromosome Breakage Sites but Not to Telomeres

(2014) Stacey Cranert et al.   EUKARYOTIC CELL

PIWI proteins and PIWI-interacting RNAs in the soma

(2014) Robert J. Ross et al.   NATURE

To be or not to be a piRNA: genomic origin and processing of piRNAs

(2014) Adrien Le Thomas et al.   GENOME BIOLOGY

RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond

(2013) Stephane E. Castel et al.   NATURE REVIEWS GENETICS

Argonaute proteins: functional insights and emerging roles

(2013) Gunter Meister   NATURE REVIEWS GENETICS

PIWI-interacting RNAs: from generation to transgenerational epigenetics

(2013) Maartje J. Luteijn et al.   NATURE REVIEWS GENETICS

Eukaryotic Argonautes come into focus

(2013) Claus-D. Kuhn et al.   TRENDS IN BIOCHEMICAL SCIENCES

Epigenetics of Ciliates

(2013) D. L. Chalker et al.   Cold Spring Harbor Perspectives in Biology

Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena

(2012) U. E. Schoeberl et al.   GENES & DEVELOPMENT

The Tetrahymena meiotic chromosome bouquet is organized by centromeres and promotes interhomolog recombination

(2012) J. Loidl et al.   JOURNAL OF CELL SCIENCE

A Tetrahymena Piwi Bound to Mature tRNA 3′ Fragments Activates the Exonuclease Xrn2 for RNA Processing in the Nucleus

(2012) Mary T. Couvillion et al.   MOLECULAR CELL

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Strand-asymmetric endogenous Tetrahymena small RNA production requires a previously uncharacterized uridylyltransferase protein partner

(2012) K. B. Talsky et al.   RNA

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Zygotic Expression of the Double-Stranded RNA Binding Motif Protein Drb2p Is Required for DNA Elimination in the Ciliate Tetrahymena thermophila

(2011) Jason A. Motl et al.   EUKARYOTIC CELL

Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila

(2011) Joseph N. Fass et al.   G3-Genes Genomes Genetics

A growth-essential Tetrahymena Piwi protein carries tRNA fragment cargo

(2010) M. T. Couvillion et al.   GENES & DEVELOPMENT

Initiation by a Eukaryotic RNA-dependent RNA Polymerase Requires Looping of the Template End and Is Influenced by the Template-tailing Activity of an Associated Uridyltransferase

(2010) Kristin Benjamin Talsky et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Domesticated piggyBac Transposase Plays Key Roles in Heterochromatin Dynamics and DNA Cleavage during Programmed DNA Deletion in Tetrahymena thermophila

(2010) Chao-Yin Cheng et al.   MOLECULAR BIOLOGY OF THE CELL

Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription

(2010) Shouhong Guang et al.   NATURE

Optimization of enzymatic reaction conditions for generating representative pools of cDNA from small RNA

(2010) D. B. Munafo et al.   RNA

Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila

(2009) M. T. Couvillion et al.   GENES & DEVELOPMENT

A single RNA-dependent RNA polymerase assembles with mutually exclusive nucleotidyl transferase subunits to direct different pathways of small RNA biogenesis

(2009) S. R. Lee et al.   RNA

2'-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena

(2009) H. M. Kurth et al.   RNA

Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure

(2008) Robert S Coyne et al.   BMC GENOMICS