Parallel adaptive evolution of geographically distant herring populations on both sides of the North Atlantic Ocean

The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing

(2016) Alvaro Martinez Barrio et al.   eLife

Estrogen receptor signaling during vertebrate development

(2015) Maria Bondesson et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The roles of genetic drift and natural selection in quantitative trait divergence along an altitudinal gradient in Arabidopsis thaliana

(2014) Y Luo et al.   HEREDITY

Sequencing pools of individuals — mining genome-wide polymorphism data without big funding

(2014) Christian Schlötterer et al.   NATURE REVIEWS GENETICS

The Dynamics of a Metapopulation: Changes in Life-History Traits in Resident Herring that Co-Occur with Oceanic Herring during Spawning

(2014) Arne Johannessen et al.   PLoS One

Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout

(2014) D. E. Pearse et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ecological genomics of local adaptation

(2013) Outi Savolainen et al.   NATURE REVIEWS GENETICS

The genetic causes of convergent evolution

(2013) David L. Stern   NATURE REVIEWS GENETICS

Gonadotrophin-Releasing Hormone Signalling Downstream of Calmodulin

(2012) P. Melamed et al.   JOURNAL OF NEUROENDOCRINOLOGY

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring

(2012) S. Lamichhaney et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

(2011) MICHAEL R. MILLER et al.   MOLECULAR ECOLOGY

Class-C SOX Transcription Factors ControlGnRHGene Expression via the Intronic Transcriptional Enhancer

(2011) Hee-Dae Kim et al.   MOLECULAR ENDOCRINOLOGY

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Whole-genome resequencing reveals loci under selection during chicken domestication

(2010) Carl-Johan Rubin et al.   NATURE

Adaptation – not by sweeps alone

(2010) Jonathan K. Pritchard et al.   NATURE REVIEWS GENETICS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature

(2010) I. R. Bradbury et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Population integrity and connectivity in Northwest Atlantic herring: a review of assumptions and evidence

(2009) R. L. Stephenson et al.   ICES JOURNAL OF MARINE SCIENCE

Slave to the rhythm: how large-scale climate cycles trigger herring (Clupea harengus) regeneration in the North Sea

(2009) J. P. Groger et al.   ICES JOURNAL OF MARINE SCIENCE

Ancestral TSH Mechanism Signals Summer in a Photoperiodic Mammal

(2008) Elodie A. Hanon et al.   CURRENT BIOLOGY

Thyrotrophin in the pars tuberalis triggers photoperiodic response

(2008) Nobuhiro Nakao et al.   NATURE

Involvement of thyrotropin in photoperiodic signal transduction in mice

(2008) H. Ono et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA