Nestedness across biological scales

A new measure of ecological network structure based on node overlap and segregation

(2015) Giovanni Strona et al.   Methods in Ecology and Evolution

The network organization of protein interactions in the spliceosome is reproduced by the simple rules of food-web models

(2015) Mathias M. Pires et al.   Scientific Reports

Scaling metabolism from individuals to reef-fish communities at broad spatial scales

(2014) D. R. Barneche et al.   ECOLOGY LETTERS

Effects of population characteristics and structure on estimates of effective population size in a house sparrow metapopulation

(2014) Helle Tessand Baalsrud et al.   MOLECULAR ECOLOGY

Diet and Diversification in the Evolution of Coral Reef Fishes

(2014) Fabio L. Lobato et al.   PLoS One

Functional over-redundancy and high functional vulnerability in global fish faunas on tropical reefs

(2014) D. Mouillot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biogeographic, historical and environmental influences on the taxonomic and functional structure of Atlantic reef fish assemblages

(2013) Mariana G. Bender et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Population size and time since island isolation determine genetic diversity loss in insular frog populations

(2013) Supen Wang et al.   MOLECULAR ECOLOGY

Using networks to measure similarity between genes: association index selection

(2013) Juan I Fuxman Bass et al.   NATURE METHODS

Factors Determining Nestedness in Complex Networks

(2013) Samuel Jonhson et al.   PLoS One

Global Biogeography of Reef Fishes: A Hierarchical Quantitative Delineation of Regions

(2013) Michel Kulbicki et al.   PLoS One

The ghost of nestedness in ecological networks

(2013) Phillip P. A. Staniczenko et al.   Nature Communications

Rare Species Support Vulnerable Functions in High-Diversity Ecosystems

(2013) David Mouillot et al.   PLOS BIOLOGY

Disentangling social networks from spatiotemporal dynamics: the temporal structure of a dolphin society

(2012) Maurício Cantor et al.   ANIMAL BEHAVIOUR

The structure of a bottlenose dolphin society is coupled to a unique foraging cooperation with artisanal fishermen

(2012) F. G. Daura-Jorge et al.   Biology Letters

Structure and mechanism of diet specialisation: testing models of individual variation in resource use with sea otters

(2012) M. Tim Tinker et al.   ECOLOGY LETTERS

Scaling of nestedness in complex networks

(2012) Deok-Sun Lee et al.   JOURNAL OF THE KOREAN PHYSICAL SOCIETY

Dynamic Protein-Protein Interaction Wiring of the Human Spliceosome

(2012) Anna Hegele et al.   MOLECULAR CELL

Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

(2012) Sandra Orchard et al.   NATURE METHODS

Cwc24p Is a General Saccharomyces cerevisiae Splicing Factor Required for the Stable U2 snRNP Binding to Primary Transcripts

(2012) Patricia P. Coltri et al.   PLoS One

The Robustness and Restoration of a Network of Ecological Networks

(2012) M. J. O. Pocock et al.   SCIENCE

The nested assembly of individual-resource networks

(2011) M. M. Pires et al.   JOURNAL OF ANIMAL ECOLOGY

Society, demography and genetic structure in the spotted hyena

(2011) KAY E. HOLEKAMP et al.   MOLECULAR ECOLOGY

The Functional Consequences of Mutualistic Network Architecture

(2011) José M. Gómez et al.   PLoS One

Integrating food web diversity, structure and stability

(2011) Neil Rooney et al.   TRENDS IN ECOLOGY & EVOLUTION

Identification of archaeal proteins that affect the exosome function in vitro

(2010) Juliana S Luz et al.   BMC BIOCHEMISTRY

Food webs are built up with nested subwebs

(2010) Michio Kondoh et al.   ECOLOGY

A straightforward computational approach for measuring nestedness using quantitative matrices

(2010) Mário Almeida-Neto et al.   ENVIRONMENTAL MODELLING & SOFTWARE

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Stability of Ecological Communities and the Architecture of Mutualistic and Trophic Networks

(2010) E. Thebault et al.   SCIENCE

Morphometric integration and modularity in configurations of landmarks: tools for evaluating a priori hypotheses

(2009) Christian Peter Klingenberg   EVOLUTION & DEVELOPMENT

Searching for Modular Structure in Complex Phenotypes: Inferences from Network Theory

(2009) S. Ivan Perez et al.   Evolutionary Biology

The architecture of mutualistic networks minimizes competition and increases biodiversity

(2009) Ugo Bastolla et al.   NATURE

The influence of social structure on the propagation of social information in artificial primate groups: A graph-based simulation approach

(2008) Bernhard Voelkl et al.   JOURNAL OF THEORETICAL BIOLOGY

A consistent metric for nestedness analysis in ecological systems: reconciling concept and measurement

(2008) Mário Almeida-Neto et al.   OIKOS

A consumer's guide to nestedness analysis

(2008) Werner Ulrich et al.   OIKOS