RNAi-based targeted gene knockdown in the model oleaginous microalgae Nannochloropsis oceanica

Reverse and Multiple Stable Isotope Probing to Study Bacterial Metabolism and Interactions at the Single Cell Level

(2016) Yun Wang et al.   ANALYTICAL CHEMISTRY

Highly efficient lipid production in the green alga Parachlorella kessleri: draft genome and transcriptome endorsed by whole-cell 3D ultrastructure

(2016) Shuhei Ota et al.   Biotechnology for Biofuels

Genome editing of model oleaginous microalgaeNannochloropsisspp. by CRISPR/Cas9

(2016) Qintao Wang et al.   PLANT JOURNAL

Label-free, rapid and quantitative phenotyping of stress response in E. coli via ramanome

(2016) Lin Teng et al.   Scientific Reports

Towards high-throughput microfluidic Raman-activated cell sorting

(2015) Qiang Zhang et al.   ANALYST

Raman-Activated Cell Sorting Based on Dielectrophoretic Single-Cell Trap and Release

(2015) Peiran Zhang et al.   ANALYTICAL CHEMISTRY

Improving microalgae for biotechnology — From genetics to synthetic biology

(2015) Monika Hlavova et al.   BIOTECHNOLOGY ADVANCES

RNA-Seq transcriptomic analysis with Bag2D software identifies key pathways enhancing lipid yield in a high lipid-producing mutant of the non-model green alga Dunaliella tertiolecta

(2015) Lina Yao et al.   Biotechnology for Biofuels

Effects of overexpression of a bHLH transcription factor on biomass and lipid production in Nannochloropsis salina

(2015) Nam Kyu Kang et al.   Biotechnology for Biofuels

Generation of random mutants to improve light-use efficiency of Nannochloropsis gaditana cultures for biofuel production

(2015) Giorgio Perin et al.   Biotechnology for Biofuels

Genetic compensation induced by deleterious mutations but not gene knockdowns

(2015) Andrea Rossi et al.   NATURE

High-throughput functional genomics using CRISPR–Cas9

(2015) Ophir Shalem et al.   NATURE REVIEWS GENETICS

Oil Accumulation by the Oleaginous DiatomFistulifera solarisas Revealed by the Genome and Transcriptome

(2015) Tsuyoshi Tanaka et al.   PLANT CELL

Transcriptional coordination of physiological responses inNannochloropsis oceanicaCCMP1779 under light/dark cycles

(2015) Eric Poliner et al.   PLANT JOURNAL

Profiling of the Early Nitrogen Stress Response in the Diatom Phaeodactylum tricornutum Reveals a Novel Family of RING-Domain Transcription Factors

(2015) Michiel Matthijs et al.   PLANT PHYSIOLOGY

Phytohormones in microalgae: a new opportunity for microalgal biotechnology?

(2015) Yandu Lu et al.   TRENDS IN PLANT SCIENCE

Genome Sequence and Transcriptome Analyses of Chrysochromulina tobin: Metabolic Tools for Enhanced Algal Fitness in the Prominent Order Prymnesiales (Haptophyceae)

(2015) Blake T. Hovde et al.   PLoS Genetics

Simultaneous accumulation of neutral lipids and biomass in Nannochloropsis oceanica IMET1 under high light intensity and nitrogen replete conditions

(2015) Yan Xiao et al.   Algal Research-Biomass Biofuels and Bioproducts

Molecular mechanisms for photosynthetic carbon partitioning into storage neutral lipids in Nannochloropsis oceanica under nitrogen-depletion conditions

(2015) Jing Jia et al.   Algal Research-Biomass Biofuels and Bioproducts

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

High-efficiency nuclear transformation of the oleaginous marineNannochloropsisspecies using PCR product

(2014) Fengjuan Li et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Quantitative dynamics of triacylglycerol accumulation in microalgae populations at single-cell resolution revealed by Raman microspectroscopy

(2014) Tingting Wang et al.   Biotechnology for Biofuels

Transcriptomic response to prolonged ethanol production in the cyanobacterium Synechocystis sp. PCC6803

(2014) Dennis Dienst et al.   Biotechnology for Biofuels

Regulation of the cholesterol biosynthetic pathway and its integration with fatty acid biosynthesis in the oleaginous microalga Nannochloropsis oceanica

(2014) Yandu Lu et al.   Biotechnology for Biofuels

Raman spectroscopy provides a rapid, non-invasive method for quantitation of starch in live, unicellular microalgae

(2014) Yuetong Ji et al.   Biotechnology Journal

Climate warming and agricultural stressors interact to determine stream periphyton community composition

(2014) Jeremy J. Piggott et al.   GLOBAL CHANGE BIOLOGY

Comparative analyses of lipidomes and transcriptomes reveal a concerted action of multiple defensive systems against photooxidative stress in Haematococcus pluvialis

(2014) Yunho Gwak et al.   JOURNAL OF EXPERIMENTAL BOTANY

Choreography of Transcriptomes and Lipidomes of Nannochloropsis Reveals the Mechanisms of Oil Synthesis in Microalgae

(2014) J. Li et al.   PLANT CELL

Antagonistic roles of abscisic acid and cytokinin during response to nitrogen depletion in oleaginous microalgaNannochloropsis oceanicaexpand the evolutionary breadth of phytohormone function

(2014) Yandu Lu et al.   PLANT JOURNAL

Membrane Glycerolipid Remodeling Triggered by Nitrogen and Phosphorus Starvation inPhaeodactylum tricornutum

(2014) Heni Abida et al.   PLANT PHYSIOLOGY

Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology

(2014) Fayza Daboussi et al.   Nature Communications

Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation

(2014) Koichi Hori et al.   Nature Communications

Genome-wide identification of transcription factors and transcription-factor binding sites in oleaginous microalgae Nannochloropsis

(2014) Jianqiang Hu et al.   Scientific Reports

Nannochloropsis Genomes Reveal Evolution of Microalgal Oleaginous Traits

(2014) Dongmei Wang et al.   PLoS Genetics

Microalgal biomass production pathways: evaluation of life cycle environmental impacts

(2013) George G Zaimes et al.   Biotechnology for Biofuels

High-CO2 tolerance in microalgae: possible mechanisms and implications for biotechnology and bioremediation

(2013) Alexei Solovchenko et al.   BIOTECHNOLOGY LETTERS

Nannochloropsis plastid and mitochondrial phylogenomes reveal organelle diversification mechanism and intragenus phylotyping strategy in microalgae

(2013) Li Wei et al.   BMC GENOMICS

Characterization of Organic Phosphorus in Lake Sediments by Sequential Fractionation and Enzymatic Hydrolysis

(2013) Yuanrong Zhu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Chromosome Scale Genome Assembly and Transcriptome Profiling of Nannochloropsis gaditana in Nitrogen Depletion

(2013) Elisa Corteggiani Carpinelli et al.   Molecular Plant

Pan genome of the phytoplankton Emiliania underpins its global distribution

(2013) Betsy A. Read et al.   NATURE

Stable transformation and reverse genetic analysis ofPenium margaritaceum: a platform for studies of charophyte green algae, the immediate ancestors of land plants

(2013) Iben Sørensen et al.   PLANT JOURNAL

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

(2013) J. Collen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptomic analysis of the oleaginous microalga Neochloris oleoabundans reveals metabolic insights into triacylglyceride accumulation

(2012) Hamid Rismani-Yazdi et al.   Biotechnology for Biofuels

Exploiting diversity and synthetic biology for the production of algal biofuels

(2012) D. Ryan Georgianna et al.   NATURE

Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles

(2012) J. A. Raven et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropsis gaditana

(2012) Randor Radakovits et al.   Nature Communications

Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779

(2012) Astrid Vieler et al.   PLoS Genetics

The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation

(2012) Guillaume Blanc et al.   GENOME BIOLOGY

NUCLEAR MONOPLOIDY AND ASEXUAL PROPAGATION OF NANNOCHLOROPSIS OCEANICA (EUSTIGMATOPHYCEAE) AS REVEALED BY ITS GENOME SEQUENCE1

(2011) Kehou Pan et al.   JOURNAL OF PHYCOLOGY

Examination of Triacylglycerol Biosynthetic Pathways via De Novo Transcriptomic and Proteomic Analyses in an Unsequenced Microalga

(2011) Michael T. Guarnieri et al.   PLoS One

High-efficiency homologous recombination in the oil-producing alga Nannochloropsis sp.

(2011) O. Kilian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics

(2011) C. J. Gobler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

(2010) J. Mark Cock et al.   NATURE

TheChlorella variabilisNC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex

(2010) Guillaume Blanc et al.   PLANT CELL

An Outlook on Microalgal Biofuels

(2010) R. H. Wijffels et al.   SCIENCE

Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri

(2010) S. E. Prochnik et al.   SCIENCE

Genome-scale DNA methylation analysis

(2010) Shaun D Fouse et al.   Epigenomics

Origins and Mechanisms of miRNAs and siRNAs

(2009) Richard W. Carthew et al.   CELL

Characterization of the Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH) Gene from the Halotolerant Alga Dunaliella salina and Inhibition of Its Expression by RNAi

(2009) Yanlong Jia et al.   CURRENT MICROBIOLOGY

Gene silencing in the marine diatom Phaeodactylum tricornutum

(2009) Valentina De Riso et al.   NUCLEIC ACIDS RESEARCH

Sensitivities of marine carbon fluxes to ocean change

(2009) U. Riebesell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

(2009) A. Z. Worden et al.   SCIENCE

Genomic Insights into Marine Microalgae

(2008) Micaela S. Parker et al.   Annual Review of Genetics

Chlorophyll Fluorescence: A Probe of Photosynthesis In Vivo

(2008) Neil R. Baker   Annual Review of Plant Biology

Lipid accumulation and CO2 utilization of Nannochloropsis oculata in response to CO2 aeration

(2008) Sheng-Yi Chiu et al.   BIORESOURCE TECHNOLOGY

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

(2008) Chris Bowler et al.   NATURE

Microalgal triacylglycerols as feedstocks for biofuel production: perspectives and advances

(2008) Qiang Hu et al.   PLANT JOURNAL

Inputs and outputs for chromatin-targeted RNAi

(2008) Simon W-L. Chan   TRENDS IN PLANT SCIENCE