Age-dependent regulation of ERF-VII transcription factor activity in Arabidopsis thaliana

Jasmonate Regulates Plant Responses to Postsubmergence Reoxygenation through Transcriptional Activation of Antioxidant Synthesis

(2017) Li-Bing Yuan et al.   PLANT PHYSIOLOGY

Plant cysteine oxidases are dioxygenases that directly enable arginyl transferase-catalysed arginylation of N-end rule targets

(2017) Mark D. White et al.   Nature Communications

ETHYLENE RESPONSE FACTOR 74 (ERF74 ) plays an essential role in controlling a respiratory burst oxidase homolog D (RbohD)-dependent mechanism in response to different stresses in Arabidopsis

(2016) Yuan Yao et al.   NEW PHYTOLOGIST

New insights into reactive oxygen species and nitric oxide signalling under low oxygen in plants

(2016) Chiara Pucciariello et al.   PLANT CELL AND ENVIRONMENT

Oxygen Sensing via the Ethylene Response Transcription Factor RAP2.12 Affects Plant Metabolism and Performance under Both Normoxia and Hypoxia

(2016) Melanie Verena Paul et al.   PLANT PHYSIOLOGY

Transcriptomic analysis of submergence-tolerant and sensitive Brachypodium distachyon ecotypes reveals oxidative stress as a major tolerance factor

(2016) Irma Karla Rivera-Contreras et al.   Scientific Reports

Oxygen Sensing and Signaling

(2015) Joost T. van Dongen et al.   Annual Review of Plant Biology

Oxygen Sensing Coordinates Photomorphogenesis to Facilitate Seedling Survival

(2015) Mohamad Abbas et al.   CURRENT BIOLOGY

Flood adaptive traits and processes: an overview

(2015) Laurentius A. C. J. Voesenek et al.   NEW PHYTOLOGIST

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

The stability and nuclear localization of the transcription factor RAP2.12 are dynamically regulated by oxygen concentration

(2015) MONIKA KOSMACZ et al.   PLANT CELL AND ENVIRONMENT

The low oxygen, oxidative and osmotic stress responses synergistically act through the ethylene response factor VII genesRAP2.12,RAP2.2andRAP2.3

(2015) Csaba Papdi et al.   PLANT JOURNAL

TheGreening after Extended Darkness1Is an N-End Rule Pathway Mutant with High Tolerance to Submergence and Starvation

(2015) Willi Riber et al.   PLANT PHYSIOLOGY

Constitutively expressed ERF-VII transcription factors redundantly activate the core anaerobic response in Arabidopsis thaliana

(2015) Liem T. Bui et al.   PLANT SCIENCE

NAC transcription factors in plant multiple abiotic stress responses: progress and prospects

(2015) Hongbo Shao et al.   Frontiers in Plant Science

Nitric Oxide Sensing in Plants Is Mediated by Proteolytic Control of Group VII ERF Transcription Factors

(2014) Daniel J. Gibbs et al.   MOLECULAR CELL

A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors inArabidopsis thaliana

(2014) Søren Lindemose et al.   NUCLEIC ACIDS RESEARCH

Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway

(2014) Daan A. Weits et al.   Nature Communications

A Trihelix DNA Binding Protein Counterbalances Hypoxia-Responsive Transcriptional Activation in Arabidopsis

(2014) Beatrice Giuntoli et al.   PLOS BIOLOGY

Large-scale gene function analysis with the PANTHER classification system

(2013) Huaiyu Mi et al.   Nature Protocols

NAC Transcription Factor SPEEDY HYPONASTIC GROWTH Regulates Flooding-Induced Leaf Movement in Arabidopsis

(2013) M. Rauf et al.   PLANT CELL

A Membrane-Bound NAC Transcription Factor, ANAC017, Mediates Mitochondrial Retrograde Signaling in Arabidopsis

(2013) S. Ng et al.   PLANT CELL

GOLLUM [FeFe]-hydrogenase-like proteins are essential for plant development in normoxic conditions and modulate energy metabolism

(2013) SAMUEL MONDY et al.   PLANT CELL AND ENVIRONMENT

The Ubiquitin System, an Immense Realm

(2012) Alexander Varshavsky   Annual Review of Biochemistry

Reactive Oxygen Species-Driven Transcription in Arabidopsis under Oxygen Deprivation

(2012) C. Pucciariello et al.   PLANT PHYSIOLOGY

AtERF71/HRE2 transcription factor mediates osmotic stress response as well as hypoxia response in Arabidopsis

(2011) Hee-Yeon Park et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization

(2011) Francesco Licausi et al.   NATURE

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

(2011) Daniel J. Gibbs et al.   NATURE

Molecular characterization of the submergence response of the Arabidopsis thaliana ecotype Columbia

(2011) Seung Cho Lee et al.   NEW PHYTOLOGIST

Transient MPK6 activation in response to oxygen deprivation and reoxygenation is mediated by mitochondria and aids seedling survival in Arabidopsis

(2011) Ruth Chang et al.   PLANT MOLECULAR BIOLOGY

Algorithm-driven Artifacts in median polish summarization of Microarray data

(2010) Federico M Giorgi et al.   BMC BIOINFORMATICS

Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data

(2010) Robert C McLeay et al.   BMC BIOINFORMATICS

The Heat-Inducible Transcription Factor HsfA2 Enhances Anoxia Tolerance in Arabidopsis

(2010) V. Banti et al.   PLANT PHYSIOLOGY

Cross-Kingdom Comparison of Transcriptomic Adjustments to Low-Oxygen Stress Highlights Conserved and Plant-Specific Responses

(2010) A. Mustroph et al.   PLANT PHYSIOLOGY

Potassium (K+) gradients serve as a mobile energy source in plant vascular tissues

(2010) P. Gajdanowicz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Low-Oxygen-Induced NAC Domain Transcription Factor ANAC102 Affects Viability of Arabidopsis Seeds following Low-Oxygen Treatment

(2009) J. A. Christianson et al.   PLANT PHYSIOLOGY

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis

(2009) A. Mustroph et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA