4.7 Article

Temperature fine-tunes Mediterranean Arabidopsis thaliana life-cycle phenology geographically

期刊

PLANT BIOLOGY
卷 20, 期 -, 页码 148-156

出版社

WILEY
DOI: 10.1111/plb.12558

关键词

Adaptive evolution; environmental gradients; flowering time; geographically weighted regressions; seed dormancy; sliding window analysis

资金

  1. Ministerio de Economia y Competitividad of Spain [CGL2016-77720-P]
  2. Severo Ochoa Programme for Centres of Excellence in R+D+I in Spain [SEV-2012-0262]
  3. NEWFORESTS project from the European Seventh Framework Programme [PIRSES-GA-2013-612645]
  4. Agency for Management of University and Research Grants of the Generalitat de Catalunya [2014-SGR-913]
  5. Technology Foundation STW [11314]
  6. VIDI programme of the Technology Foundation STW [12951]

向作者/读者索取更多资源

To understand how adaptive evolution in life-cycle phenology operates in plants, we need to unravel the effects of geographic variation in putative agents of natural selection on life-cycle phenology by considering all key developmental transitions and their co-variation patterns. We address this goal by quantifying the temperature-driven and geographically varying relationship between seed dormancy and flowering time in the annual Arabidopsis thaliana across the Iberian Peninsula. We used data on genetic variation in two major life-cycle traits, seed dormancy (DSDS50) and flowering time (FT), in a collection of 300 A.thaliana accessions from the Iberian Peninsula. The geographically varying relationship between life-cycle traits and minimum temperature, a major driver of variation in DSDS50 and FT, was explored with geographically weighted regressions (GWR). The environmentally varying correlation between DSDS50 and FT was analysed by means of sliding window analysis across a minimum temperature gradient. Maximum local adjustments between minimum temperature and life-cycle traits were obtained in the southwest Iberian Peninsula, an area with the highest minimum temperatures. In contrast, in off-southwest locations, the effects of minimum temperature on DSDS50 were rather constant across the region, whereas those of minimum temperature on FT were more variable, with peaks of strong local adjustments of GWR models in central and northwest Spain. Sliding window analysis identified a minimum temperature turning point in the relationship between DSDS50 and FT around a minimum temperature of 7.2 degrees C. Above this minimum temperature turning point, the variation in the FT/DSDS50 ratio became rapidly constrained and the negative correlation between FT and DSDS50 did not increase any further with increasing minimum temperatures. The southwest Iberian Peninsula emerges as an area where variation in life-cycle phenology appears to be restricted by the duration and severity of the hot summer drought. The temperature-driven varying relationship between DSDS50 and FT detected environmental boundaries for the co-evolution between FT and DSDS50 in A.thaliana. In the context of global warming, we conclude that A.thaliana phenology from the southwest Iberian Peninsula, determined by early flowering and deep seed dormancy, might become the most common life-cycle phenotype for this annual plant in the region.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Plant Sciences

The mRNA-binding proteome of a critical phase transition during Arabidopsis seed germination

Nikita Sajeev, Anirban Baral, Antoine H. P. America, Leo A. J. Willems, Remy Merret, Leonie Bentsink

Summary: Arabidopsis thaliana seed germination undergoes extensive translational control at two critical phase transitions: hydration translational shift and germination translational shift (GTS). This study identified 30 seed specific RBPs and 22 dynamic RBPs during GTS, including stress granule markers, indicating seeds may quickly adapt mRNA translation in response to environmental changes. This research provides insight into the world of RBPs during seed germination and their potential regulatory role in this developmentally regulated process.

NEW PHYTOLOGIST (2022)

Article Plant Sciences

The membrane associated NAC transcription factors ANAC060 and ANAC040 are functionally redundant in the inhibition of seed dormancy in Arabidopsis thaliana

Shuang Song, Leo A. J. Willems, Ao Jiao, Tao Zhao, M. Eric Schranz, Leonie Bentsink

Summary: The NAC transcription factors ANAC040, ANAC060, and ANAC089 in Arabidopsis thaliana are highly homologous, but have distinct functions in the regulation of seed germination. Swapping experiments revealed functional redundancy between ANAC060 and ANAC040, but not between ANAC060 and ANAC089.

JOURNAL OF EXPERIMENTAL BOTANY (2022)

Article Multidisciplinary Sciences

An oxygen-sensing mechanism for angiosperm adaptation to altitude

Mohamad Abbas, Gunjan Sharma, Charlene Dambire, Julietta Marquez, Carlos Alonso-Blanco, Karina Proano, Michael J. Holdsworth

Summary: The molecular mechanism by which plants adapt to high altitudes is unknown. This study demonstrates a relationship between oxygen-sensing and chlorophyll biosynthesis in flowering plants. The expression of the FLU gene, which suppresses chlorophyll biosynthesis, is regulated by oxygen concentrations. The steady-state levels of protochlorophyllide and expression of genes related to hypoxia also show altitudinal variations in different plant species. This suggests a genetic adaptation mechanism to altitude through alteration of the sensitivity of the oxygen-sensing system.

NATURE (2022)

Article Plant Sciences

Differential environmental and genomic architectures shape the natural diversity for trichome patterning and morphology in different Arabidopsis organs

Noelia Arteaga, Belen Mendez-Vigo, Alberto Fuster-Pons, Marija Savic, Alba Murillo-Sanchez, F. Xavier Pico, Carlos Alonso-Blanco

Summary: This study investigates the ecological, genetic, and molecular basis of trichome patterning and branching in multiple organs of Arabidopsis. The findings suggest a precise fit between trichome patterning and climate throughout the life cycle of Arabidopsis, and reveal partly independent genetic bases for vegetative and reproductive phases. In addition, the study identifies a complex locus on chromosome 2 where two adjacent MYB genes display differential effects on trichome patterning in several organs.

PLANT CELL AND ENVIRONMENT (2022)

Article Plant Sciences

Spatiotemporal dynamics of genetic variation at the quantitative and molecular levels within a natural Arabidopsis thaliana population

Belen Mendez-Vigo, Antonio R. Castilla, Rocio Gomez, Arnald Marcer, Carlos Alonso-Blanco, F. Xavier Pico

Summary: This study focuses on the effects of spatiotemporal heterogeneity on genetic variation in a natural population of Arabidopsis thaliana. The results show that temporal variation is more significant than spatial variation, and genetic relatedness plays a key role in phenotypic variation.

JOURNAL OF ECOLOGY (2022)

Article Plant Sciences

A Role for Allantoate Amidohydrolase (AtAAH) in the Germination of Arabidopsis thaliana Seeds

Farzaneh Yazdanpanah, Leo A. J. Willems, Hanzi He, Henk W. M. Hilhorst, Leonie Bentsink

Summary: Seed dormancy is a complex trait controlled by genetic and environmental factors, and it is affected by nitrate and AtAAH. Nitrate reduces seed dormancy, while AtAAH and other genes are up-regulated in dormant seeds. Ataah mutant seeds have higher dormancy and accumulate high levels of uric acid, allantoin, and urea.

PLANT AND CELL PHYSIOLOGY (2022)

Article Plant Sciences

SeedTransNet: a directional translational network revealing regulatory patterns during seed maturation and germination

Bing Bai, Bastian Schiffthaler, Sjors van der Horst, Leo Willems, Alexander Vergara, Jacob Karstrom, Niklas Mahler, Nicolas Delhomme, Leonie Bentsink, Johannes Hanson

Summary: We describe the dynamic changes in translation that occur during seed maturation, germination, and seedling establishment. Through network analysis, we identified putative regulatory relationships and confirmed some of them in vivo. The construction of SeedTransNet, a regulatory network based on polysome occupancy data, allowed us to predict translational regulatory pathways involving hundreds of genes and specific transcript sequence features suggesting separate regulatory circuits. Our study demonstrated the usefulness of SeedTransNet in identifying regulatory pathways during seed phase transitions.

JOURNAL OF EXPERIMENTAL BOTANY (2023)

Article Plant Sciences

Unravelling plant diversification: Intraspecific genetic differentiation in hybridizing Anacyclus species in the western Mediterranean Basin

A. Bruno Agudo, F. Xavier Pico, Ruben G. Mateo, Arnald Marcer, Ruben Torices, Ines Alvarez

Summary: This study aimed to estimate genetic identity, explore the role of hybridization in phenotypic diversity, and investigate the effect of climate on species and genetic cluster distribution in three Anacyclus species. Population genetic analysis and ecological niche modeling were employed, revealing a correspondence between species and genetic clusters, except for A. clavatus having three genetic clusters. It was also suggested that gene flow and introgression contribute to phenotypic diversity and ecological differentiation in these species.

AMERICAN JOURNAL OF BOTANY (2023)

Article Biodiversity Conservation

Examining the spatiotemporal variation of genetic diversity and genetic rarity in the natural plant recolonization of human-altered areas

Pedro J. J. Garrote, Antonio R. R. Castilla, F. Xavier Pico, Jose M. M. Fedriani

Summary: This study examines the spatiotemporal genetic variation in seedlings of a keystone pioneer palm and its impact on plant recruitment. The authors found that seedlings from carnivore-dispersed seeds showed moderate to high levels of genetic diversity and no inbreeding. There was a genetic sub-structure among seedlings, with sibling relationships varying depending on spatial scale. While rare genotypes arrived slightly later and tended to be spatially isolated, genetic rarity was not a significant predictor of seedling survival. The study emphasizes the importance of studying plant-animal interactions from a genetic perspective for plant conservation.

CONSERVATION GENETICS (2023)

Article Multidisciplinary Sciences

Cycles of satellite and transposon evolution in Arabidopsis centromeres

Piotr Wlodzimierz, Fernando A. Rabanal, Robin Burns, Matthew Naish, Elias Primetis, Alison Scott, Terezie Mandakova, Nicola Gorringe, Andrew J. Tock, Daniel Holland, Katrin Fritschi, Anette Habring, Christa Lanz, Christie Patel, Theresa Schlegel, Maximilian Collenberg, Miriam Mielke, Magnus Nordborg, Fabrice Roux, Gautam Shirsekar, Carlos Alonso-Blanco, Martin A. Lysak, Polina Y. Novikova, Alexandros Bousios, Detlef Weigel, Ian R. Henderson

Summary: Centromeres play a critical role in cell division by loading specific histone variant nucleosomes, forming kinetochores, and allowing chromosome segregation. Despite their conserved function, there is diversity in centromere size and structure among different species. By analyzing centromeres from Arabidopsis thaliana and Arabidopsis lyrata accessions, we found a high degree of intra- and inter-species diversity. Our findings suggest that centromere evolution is driven by cycles of transposon invasion and purging through satellite homogenization, which contribute to species diversification.

NATURE (2023)

Biographical-Item Plant Sciences

in Memoriam: J. Derek Bewley 1943-2023

Kent J. Bradford, Henk W. M. Hilhorst

SEED SCIENCE RESEARCH (2023)

Biographical-Item Plant Sciences

In Memoriam: Yitzchak Gutterman (28 January 1936-17 October 2022)

Henk Hilhorst

SEED SCIENCE RESEARCH (2023)

Article Agronomy

Plasticity of maternal environment-dependent expression-QTLs of tomato seeds

Mark G. Sterken, Harm Nijveen, Martijn van Zanten, Jose M. Jimenez-Gomez, Nafiseh Geshnizjani, Leo A. J. Willems, Juriaan Rienstra, Henk W. M. Hilhorst, Wilco Ligterink, Basten L. Snoek

Summary: Seeds play a crucial role in plant reproduction, survival, and dispersal, with germination ability and seedling establishment strongly influenced by seed quality and environmental factors. This study focuses on tomato seeds and explores how genetic variation and the maternal environment impact seed and seedling quality traits and environmental responsiveness at the transcriptome level. By using RNA-sequencing, a genetic map was constructed using a tomato recombinant inbred line population and gene expression was measured for seeds that matured in different nutritional environments. This research provides insight into the genetic landscape of gene regulation in dry seeds and its relationship with the maternal nutrient environment.

THEORETICAL AND APPLIED GENETICS (2023)

暂无数据