Length-independent DNA packing into nanopore zero-mode waveguides for low-input DNA sequencing

Sequence-Specific Recognition of MicroRNAs and Other Short Nucleic Acids with Solid-State Nanopores

(2016) Osama K. Zahid et al.   NANO LETTERS

Nanopore sensing at ultra-low concentrations using single-molecule dielectrophoretic trapping

(2016) Kevin J. Freedman et al.   Nature Communications

Optical observation of DNA motion during and immediately after nanopore translocation

(2015) Hirohito Yamazaki et al.   Applied Physics Express

FRET Enhancement in Aluminum Zero-Mode Waveguides

(2015) Juan de Torres et al.   CHEMPHYSCHEM

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing

(2015) Konstantin Berlin et al.   NATURE BIOTECHNOLOGY

Genetic variation and the de novo assembly of human genomes

(2015) Mark J. P. Chaisson et al.   NATURE REVIEWS GENETICS

Entropic cages for trapping DNA near a nanopore

(2015) Xu Liu et al.   Nature Communications

Reversible Positioning of Single Molecules inside Zero-Mode Waveguides

(2014) Joseph Larkin et al.   NANO LETTERS

Two Color DNA Barcode Detection in Photoluminescence Suppressed Silicon Nitride Nanopores

(2014) Ossama N. Assad et al.   NANO LETTERS

Solid-state nanopores and nanopore arrays optimized for optical detection

(2014) Furat Sawafta et al.   Nanoscale

Resolving the complexity of the human genome using single-molecule sequencing

(2014) Mark J. P. Chaisson et al.   NATURE

Nonequilibrium dynamics and ultraslow relaxation of confined DNA during viral packaging

(2014) Z. T. Berndsen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Direct sequencing of small genomes on the Pacific Biosciences RS without library preparation

(2013) Paul Coupland et al.   BIOTECHNIQUES

Analysis of RNA base modification and structural rearrangement by single-molecule real-time detection of reverse transcription

(2013) Igor D Vilfan et al.   JOURNAL OF NANOBIOTECHNOLOGY

Zero-Mode Waveguides for Single-Molecule Analysis

(2012) Paul Zhu et al.   Annual Review of Biophysics

Live-Cell Imaging of Single Receptor Composition Using Zero-Mode Waveguide Nanostructures

(2012) Christopher I. Richards et al.   NANO LETTERS

Measurement of the Docking Time of a DNA Molecule onto a Solid-State Nanopore

(2012) Stefan W. Kowalczyk et al.   NANO LETTERS

Structural Organization of DNA in Chlorella Viruses

(2012) Timo Wulfmeyer et al.   PLoS One

A Pore−Cavity−Pore Device to Trap and Investigate Single Nanoparticles and DNA Molecules in a Femtoliter Compartment: Confined Diffusion and Narrow Escape

(2011) Daniel Pedone et al.   NANO LETTERS

A Zeptoliter Volume Meter for Analysis of Single Protein Molecules

(2011) Tor Sandén et al.   NANO LETTERS

Genome packaging in viruses

(2010) Siyang Sun et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

DNA capture into a nanopore: Interplay of diffusion and electrohydrodynamics

(2010) Alexander Y. Grosberg et al.   JOURNAL OF CHEMICAL PHYSICS

Theory of capture rate in polymer translocation

(2010) M. Muthukumar   JOURNAL OF CHEMICAL PHYSICS

Real-time tRNA transit on single translating ribosomes at codon resolution

(2010) Sotaro Uemura et al.   NATURE

Direct detection of DNA methylation during single-molecule, real-time sequencing

(2010) Benjamin A Flusberg et al.   NATURE METHODS

Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors

(2010) Meni Wanunu et al.   Nature Nanotechnology

Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient

(2009) Meni Wanunu et al.   Nature Nanotechnology

Monitoring of Real-Time Streptavidin−Biotin Binding Kinetics Using Droplet Microfluidics

(2008) Monpichar Srisa-Art et al.   ANALYTICAL CHEMISTRY

Real-Time Imaging of Single-Molecule Fluorescence with a Zero-Mode Waveguide for the Analysis of Protein−Protein Interaction

(2008) Takeo Miyake et al.   ANALYTICAL CHEMISTRY

DNA Translocation Governed by Interactions with Solid-State Nanopores

(2008) Meni Wanunu et al.   BIOPHYSICAL JOURNAL

Long, Processive Enzymatic DNA Synthesis Using 100% Dye-Labeled Terminal Phosphate-Linked Nucleotides

(2008) Jonas Korlach et al.   NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS

Parallel confocal detection of single molecules in real time

(2008) Paul M. Lundquist et al.   OPTICS LETTERS

Real-Time DNA Sequencing from Single Polymerase Molecules

(2008) J. Eid et al.   SCIENCE