标题
Annotation-free quantification of RNA splicing using LeafCutter
作者
关键词
-
出版物
NATURE GENETICS
Volume 50, Issue 1, Pages 151-158
出版商
Springer Nature
发表日期
2017-12-07
DOI
10.1038/s41588-017-0004-9
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Alternative splicing modulated by genetic variants demonstrates accelerated evolution regulated by highly conserved proteins
- (2016) Yun-Hua Esther Hsiao et al. GENOME RESEARCH
- RNA splicing is a primary link between genetic variation and disease
- (2016) Yang I. Li et al. SCIENCE
- Survey of the Heritability and Sparse Architecture of Gene Expression Traits across Human Tissues
- (2016) Heather E. Wheeler et al. PLoS Genetics
- A new view of transcriptome complexity and regulation through the lens of local splicing variations
- (2016) Jorge Vaquero-Garcia et al. eLife
- Alternative Splicing QTLs in European and African Populations
- (2015) Halit Ongen et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Fast and efficient QTL mapper for thousands of molecular phenotypes
- (2015) Halit Ongen et al. BIOINFORMATICS
- WASP: allele-specific software for robust molecular quantitative trait locus discovery
- (2015) Bryce van de Geijn et al. NATURE METHODS
- Discover hidden splicing variations by mapping personal transcriptomes to personal genomes
- (2015) Shayna Stein et al. NUCLEIC ACIDS RESEARCH
- Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms
- (2014) Rob Patro et al. NATURE BIOTECHNOLOGY
- rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data
- (2014) Shihao Shen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identification of genetic variants associated with alternative splicing using sQTLseekeR
- (2014) Jean Monlong et al. Nature Communications
- EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments
- (2013) Ning Leng et al. BIOINFORMATICS
- MBNL proteins repress ES-cell-specific alternative splicing and reprogramming
- (2013) Hong Han et al. NATURE
- Transcriptome and genome sequencing uncovers functional variation in humans
- (2013) Tuuli Lappalainen et al. NATURE
- OLego: fast and sensitive mapping of spliced mRNA-Seq reads using small seeds
- (2013) Jie Wu et al. NUCLEIC ACIDS RESEARCH
- Drift and conservation of differential exon usage across tissues in primate species
- (2013) A. Reyes et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cellular Source and Mechanisms of High Transcriptome Complexity in the Mammalian Testis
- (2013) Magali Soumillon et al. Cell Reports
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs
- (2012) H. Tilgner et al. GENOME RESEARCH
- Detecting differential usage of exons from RNA-seq data
- (2012) S. Anders et al. GENOME RESEARCH
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues
- (2012) J. Merkin et al. SCIENCE
- The Evolutionary Landscape of Alternative Splicing in Vertebrate Species
- (2012) N. L. Barbosa-Morais et al. SCIENCE
- Origins, evolution, and phenotypic impact of new genes
- (2010) H. Kaessmann GENOME RESEARCH
- Analysis and design of RNA sequencing experiments for identifying isoform regulation
- (2010) Yarden Katz et al. NATURE METHODS
- Association of CD40 with rheumatoid arthritis confirmed in a large UK case-control study
- (2009) G. Orozco et al. ANNALS OF THE RHEUMATIC DISEASES
- Regulation of Vertebrate Nervous System Alternative Splicing and Development by an SR-Related Protein
- (2009) John A. Calarco et al. CELL
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started