MSstatsQC: Longitudinal System Suitability Monitoring and Quality Control for Targeted Proteomic Experiments

An Automated Pipeline to Monitor System Performance in Liquid Chromatography–Tandem Mass Spectrometry Proteomic Experiments

(2016) Michael S. Bereman et al.   JOURNAL OF PROTEOME RESEARCH

The 2012/2013 ABRF Proteomic Research Group Study: Assessing Longitudinal Intralaboratory Variability in Routine Peptide Liquid Chromatography Tandem Mass Spectrometry Analyses

(2015) Keiryn L. Bennett et al.   MOLECULAR & CELLULAR PROTEOMICS

Panorama: A Targeted Proteomics Knowledge Base

(2014) Vagisha Sharma et al.   JOURNAL OF PROTEOME RESEARCH

Implementation of Statistical Process Control for Proteomic Experiments Via LC MS/MS

(2014) Michael S. Bereman et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry-based Assay Development Using a Fit-for-Purpose Approach

(2014) Steven A. Carr et al.   MOLECULAR & CELLULAR PROTEOMICS

Metriculator: quality assessment for mass spectrometry-based proteomics

(2013) R. M. Taylor et al.   BIOINFORMATICS

An introduction to statistical process control in research proteomics

(2013) David Bramwell   Journal of Proteomics

Design, Implementation and Multisite Evaluation of a System Suitability Protocol for the Quantitative Assessment of Instrument Performance in Liquid Chromatography-Multiple Reaction Monitoring-MS (LC-MRM-MS)

(2013) Susan E. Abbatiello et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present

(2012) Marcus Bantscheff et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

QuaMeter: Multivendor Performance Metrics for LC–MS/MS Proteomics Instrumentation

(2012) Ze-Qiang Ma et al.   ANALYTICAL CHEMISTRY

SIMPATIQCO: A Server-Based Software Suite Which Facilitates Monitoring the Time Course of LC–MS Performance Metrics on Orbitrap Instruments

(2012) Peter Pichler et al.   JOURNAL OF PROTEOME RESEARCH

Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions

(2012) Paola Picotti et al.   NATURE METHODS

Selected reaction monitoring applied to proteomics

(2011) Sebastien Gallien et al.   JOURNAL OF MASS SPECTROMETRY

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

(2010) Brendan MacLean et al.   BIOINFORMATICS

A HUPO test sample study reveals common problems in mass spectrometry–based proteomics

(2009) Alexander W Bell et al.   NATURE METHODS