Integrated Cellular and Plasma Proteomics of Contrasting B-cell Cancers Reveals Common, Unique and Systemic Signatures

Fibronectin-1 expression is increased in aggressive thyroid cancer and favors the migration and invasion of cancer cells

(2016) Marialuisa Sponziello et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia

(2016) Sheng Li et al.   NATURE MEDICINE

The PI3K/mTOR inhibitor PF-04691502 induces apoptosis and inhibits microenvironmental signaling in CLL and the E -TCL1 mouse model

(2015) M. D. Blunt et al.   BLOOD

Two types of BCR interactions are positively selected during leukemia development in the E -TCL1 transgenic mouse model of CLL

(2015) S. Iacovelli et al.   BLOOD

The Long Journey of TCL1 Transgenic Mice: Lessons Learned in the Last 15 Years

(2015) Yuri Pekarsky et al.   GENE EXPRESSION

Multiplexed, Quantitative Workflow for Sensitive Biomarker Discovery in Plasma Yields Novel Candidates for Early Myocardial Injury

(2015) Hasmik Keshishian et al.   MOLECULAR & CELLULAR PROTEOMICS

Epigenetic Heterogeneity of B-Cell Lymphoma: Chromatin Modifiers

(2015) Lydia Hopp et al.   Genes

Interactions between Hyaluronan and Its Receptors (CD44, RHAMM) Regulate the Activities of Inflammation and Cancer

(2015) Suniti Misra et al.   Frontiers in Immunology

Serum expression of S100A6 is a potential detection marker in patients with urothelial carcinoma in the urinary bladder

(2014) Morihiro NISHI et al.   BIOMEDICAL RESEARCH-TOKYO

Upregulation of FcγRIIb on monocytes is necessary to promote the superagonist activity of TGN1412

(2014) Khiyam Hussain et al.   BLOOD

Mouse models in the study of chronic lymphocytic leukemia pathogenesis and therapy

(2014) G. Simonetti et al.   BLOOD

Regulation of Acetylation of Histone Deacetylase 2 by p300/CBP-Associated Factor/Histone Deacetylase 5 in the Development of Cardiac Hypertrophy

(2014) Gwang Hyeon Eom et al.   CIRCULATION RESEARCH

S100A6 as a Potential Serum Prognostic Biomarker and Therapeutic Target in Gastric Cancer

(2014) Jianli Zhang et al.   DIGESTIVE DISEASES AND SCIENCES

Whole Serum 3D LC-nESI-FTMS Quantitative Proteomics Reveals Sexual Dimorphism in the Milieu Intérieur of Overweight and Obese Adults

(2014) Nasser M. Al-Daghri et al.   JOURNAL OF PROTEOME RESEARCH

A draft map of the human proteome

(2014) Min-Sik Kim et al.   NATURE

Mass-spectrometry-based draft of the human proteome

(2014) Mathias Wilhelm et al.   NATURE

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

(2014) Juan A Vizcaíno et al.   NATURE BIOTECHNOLOGY

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Identification of Potential Serum Proteomic Biomarkers for Clear Cell Renal Cell Carcinoma

(2014) Juan Yang et al.   PLoS One

Macrophage Capping Protein CapG Is a Putative Oncogene Involved in Migration and Invasiveness in Ovarian Carcinoma

(2014) J. Glaser et al.   Biomed Research International

Downregulation of MHC-I Expression Is Prevalent but Reversible in Merkel Cell Carcinoma

(2014) K. G. Paulson et al.   Cancer Immunology Research

Causal analysis approaches in Ingenuity Pathway Analysis

(2013) Andreas Krämer et al.   BIOINFORMATICS

Intrinsic T- and B-cell defects impair T-cell-dependent antibody responses in mice lacking the actin-bundling protein L-plastin

(2013) Elizabeth M. Todd et al.   EUROPEAN JOURNAL OF IMMUNOLOGY

Immunodepletion Plasma Proteomics by TripleTOF 5600 and Orbitrap Elite/LTQ-Orbitrap Velos/Q Exactive Mass Spectrometers

(2013) Kelly A. Jones et al.   JOURNAL OF PROTEOME RESEARCH

DMSO enhances electrospray response, boosting sensitivity of proteomic experiments

(2013) Hannes Hahne et al.   NATURE METHODS

Plasma Proteome Database as a resource for proteomics research: 2014 update

(2013) Vishalakshi Nanjappa et al.   NUCLEIC ACIDS RESEARCH

Overexpression of TCL1 activates the endoplasmic reticulum stress response: a novel mechanism of leukemic progression in mice

(2012) C. L. Kriss et al.   BLOOD

Tristetraprolin Impairs Myc-Induced Lymphoma and Abolishes the Malignant State

(2012) Robert J. Rounbehler et al.   CELL

Molecular genetic characterization of lymphoma: Application to cytology diagnosis

(2012) Rachel C. Ochs et al.   DIAGNOSTIC CYTOPATHOLOGY

RHAMM/HMMR (CD168) is not an ideal target antigen for immunotherapy of acute myeloid leukemia

(2012) S. Snauwaert et al.   HAEMATOLOGICA

Burkitt's lymphoma

(2012) Elizabeth M Molyneux et al.   LANCET

The genetic landscape of mutations in Burkitt lymphoma

(2012) Cassandra Love et al.   NATURE GENETICS

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

(2012) Christine Vogel et al.   NATURE REVIEWS GENETICS

The Actin-Bundling Protein L-Plastin Is Essential for Marginal Zone B Cell Development

(2011) E. M. Todd et al.   JOURNAL OF IMMUNOLOGY

A High-Confidence Human Plasma Proteome Reference Set with Estimated Concentrations in PeptideAtlas

(2011) Terry Farrah et al.   MOLECULAR & CELLULAR PROTEOMICS

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Minimising iTRAQ ratio compression through understanding LC-MS elution dependence and high-resolution HILIC fractionation

(2011) Saw Yen Ow et al.   PROTEOMICS

The role of statistical power analysis in quantitative proteomics

(2011) Yishai Levin   PROTEOMICS

A Novel Multidimensional Protein Identification Technology Approach Combining Protein Size Exclusion Prefractionation, Peptide Zwitterion−Ion Hydrophilic Interaction Chromatography, and Nano-Ultraperformance RP Chromatography/nESI-MS2for the in-Depth Analysis of the Serum Proteome and Phosphoproteome: Application to Clinical Sera Derived from Humans with Benign Prostate Hyperplasia

(2010) Spiros D. Garbis et al.   ANALYTICAL CHEMISTRY

Pseudopodial Actin Dynamics Control Epithelial-Mesenchymal Transition in Metastatic Cancer Cells

(2010) Jay Shankar et al.   CANCER RESEARCH

Serum Degradome Markers for the Detection of Breast Cancer

(2010) Annemieke W. J. van Winden et al.   JOURNAL OF PROTEOME RESEARCH

Addressing Accuracy and Precision Issues in iTRAQ Quantitation

(2010) Natasha A. Karp et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative Kinetic Study of the Actin-Bundling Protein L-Plastin and of Its Impact on Actin Turn-Over

(2010) Ziad Al Tanoury et al.   PLoS One

Induction of ectopic Myc target gene JAG2 augments hypoxic growth and tumorigenesis in a human B-cell model

(2010) Jason T. Yustein et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Definition of a Target for Immunotherapy and Results of the First Peptide Vaccination Study in Chronic Lymphocytic Leukemia

(2010) J. Tabarkiewicz et al.   TRANSPLANTATION PROCEEDINGS

Guidelines for the diagnosis and treatment of chronic lymphocytic leukemia: a report from the International Workshop on Chronic Lymphocytic Leukemia updating the National Cancer Institute-Working Group 1996 guidelines

(2008) M. Hallek et al.   BLOOD

Utilization of Pathway Signatures to Reveal Distinct Types of B Lymphoma in the E -myc Model and Human Diffuse Large B-Cell Lymphoma

(2008) S. Mori et al.   CANCER RESEARCH

The Lupus-Related Lmb3 Locus Contains a Disease-Suppressing Coronin-1A Gene Mutation

(2008) M. Katarina Haraldsson et al.   IMMUNITY

Acute tumor lysis syndrome after rituximab administration in Burkitt’s lymphoma

(2008) Zaher K. Otrock et al.   Internal and Emergency Medicine