Soil microbial communities are shaped by plant-driven changes in resource availability during secondary succession

Endemism and functional convergence across the North American soil mycobiome

(2014) J. M. Talbot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial succession in Antarctic soils of two glacier forefields on Larsemann Hills, East Antarctica

(2013) Felizitas Bajerski et al.   FEMS MICROBIOLOGY ECOLOGY

Soil bacterial community succession during long-term ecosystem development

(2013) Kamlesh Jangid et al.   MOLECULAR ECOLOGY

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

RefSeq microbial genomes database: new representation and annotation strategy

(2013) Tatiana Tatusova et al.   NUCLEIC ACIDS RESEARCH

Long-term changes in soil microbial communities during primary succession

(2013) Nick A. Cutler et al.   SOIL BIOLOGY & BIOCHEMISTRY

FunGene: the functional gene pipeline and repository

(2013) Jordan A. Fish et al.   Frontiers in Microbiology

Phylogenetic conservatism of functional traits in microorganisms

(2012) Adam C Martiny et al.   ISME Journal

Fungal community on decomposing leaf litter undergoes rapid successional changes

(2012) Jana Voříšková et al.   ISME Journal

PeroxiBase: a database for large-scale evolutionary analysis of peroxidases

(2012) Nizar Fawal et al.   NUCLEIC ACIDS RESEARCH

Soil enzymes in a changing environment: Current knowledge and future directions

(2012) Richard G. Burns et al.   SOIL BIOLOGY & BIOCHEMISTRY

Litter decay rates are determined by lignin chemistry

(2011) Jennifer M. Talbot et al.   BIOGEOCHEMISTRY

Soil and plant factors driving the community of soil-borne microorganisms across chronosequences of secondary succession of chalk grasslands with a neutral pH

(2011) Eiko Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Bacterial, Archaeal and Fungal Succession in the Forefield of a Receding Glacier

(2011) Anita Zumsteg et al.   MICROBIAL ECOLOGY

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

Bacterial community assembly based on functional genes rather than species

(2011) C. Burke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional diversity in resource use by fungi

(2010) Krista L. McGuire et al.   ECOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Phylogenetic similarity and structure of Agaricomycotina communities across a forested landscape

(2010) IVAN P. EDWARDS et al.   MOLECULAR ECOLOGY

Life history determines biogeographical patterns of soil bacterial communities over multiple spatial scales

(2010) A. BISSETT et al.   MOLECULAR ECOLOGY

A flexible and efficient template format for circular consensus sequencing and SNP detection

(2010) K. J. Travers et al.   NUCLEIC ACIDS RESEARCH

Is vegetation composition or soil chemistry the best predictor of the soil microbial community?

(2010) Ruth J. Mitchell et al.   PLANT AND SOIL

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics

(2010) A. S. Amend et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Fruiting body and soil rDNA sampling detects complementary assemblage of Agaricomycotina (Basidiomycota, Fungi) in a hemlock-dominated forest plot in southern Ontario

(2008) TERESITA M. PORTER et al.   MOLECULAR ECOLOGY

Links between plant litter chemistry, species diversity, and below-ground ecosystem function

(2008) C. L. Meier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA