Recent advances in auxin research in rice and their implications for crop improvement

Generation of Targeted Point Mutations in Rice by a Modified CRISPR/Cas9 System

(2017) Jingying Li et al.   Molecular Plant

Advances in understanding broad-spectrum resistance to pathogens in rice

(2017) Yinggen Ke et al.   PLANT JOURNAL

Auxin perception and downstream events

(2016) Lucia C. Strader et al.   CURRENT OPINION IN PLANT BIOLOGY

Mechanisms of auxin signaling

(2016) Meirav Lavy et al.   DEVELOPMENT

Regulation of polar auxin transport by protein and lipid kinases

(2016) Laia Armengot et al.   JOURNAL OF EXPERIMENTAL BOTANY

The pleiotropicABNORMAL FLOWER AND DWARF1affects plant height, floral development and grain yield in rice

(2016) Deyong Ren et al.   Journal of Integrative Plant Biology

Engineering Herbicide-Resistant Rice Plants through CRISPR/Cas9-Mediated Homologous Recombination of Acetolactate Synthase

(2016) Yongwei Sun et al.   Molecular Plant

The Effects of High Steady State Auxin Levels on Root Cell Elongation in Brachypodium

(2016) David Pacheco-Villalobos et al.   PLANT CELL

Dioxygenase-encodingAtDAO1gene controls IAA oxidation and homeostasis inArabidopsis

(2016) Silvana Porco et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DAO1 catalyzes temporal and tissue-specific oxidative inactivation of auxin inArabidopsis thaliana

(2016) Jun Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rice Dwarf Virus P2 Protein Hijacks Auxin Signaling by Directly Targeting the Rice OsIAA10 Protein, Enhancing Viral Infection and Disease Development

(2016) Lian Jin et al.   PLoS Pathogens

Auxin Crosstalk to Plant Immune Networks: A Plant-Pathogen Interaction Perspective

(2015) Muhammad Naseem et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

A Robust CRISPR/Cas9 System for Convenient, High-Efficiency Multiplex Genome Editing in Monocot and Dicot Plants

(2015) Xingliang Ma et al.   Molecular Plant

SCFTIR1/AFB-Based Auxin Perception: Mechanism and Role in Plant Growth and Development

(2015) Mohammad Salehin et al.   PLANT CELL

OsAUX1 controls lateral root initiation in rice (Oryza sativa L.)

(2015) Heming Zhao et al.   PLANT CELL AND ENVIRONMENT

OsPIN5bmodulates rice (Oryza sativa) plant architecture and yield by changing auxin homeostasis, transport and distribution

(2015) Guangwen Lu et al.   PLANT JOURNAL

The auxin transporter, OsAUX1, is involved in primary root and root hair elongation and in Cd stress responses in rice (Oryza sativaL.)

(2015) ChenLiang Yu et al.   PLANT JOURNAL

OsARF16, a transcription factor regulating auxin redistribution, is required for iron deficiency response in rice (Oryza sativa L.)

(2015) Chenjia Shen et al.   PLANT SCIENCE

OsIAA6, a member of the rice Aux/IAA gene family, is involved in drought tolerance and tiller outgrowth

(2015) Harin Jung et al.   PLANT SCIENCE

Auxin binding protein 1 (ABP1) is not required for either auxin signaling orArabidopsisdevelopment

(2015) Yangbin Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activation ofBig Grain1significantly improves grain size by regulating auxin transport in rice

(2015) Linchuan Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PIN proteins and the evolution of plant development

(2015) Tom Bennett   TRENDS IN PLANT SCIENCE

Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling

(2015) Hongwei Jing et al.   Nature Communications

Environmental, developmental, and genetic factors controlling root system architecture

(2015) F. Malekpoor Mansoorkhani et al.   Biotechnology & Genetic Engineering Reviews

Adventitious Roots and Lateral Roots: Similarities and Differences

(2014) Catherine Bellini et al.   Annual Review of Plant Biology

The riceFISH BONEgene encodes a tryptophan aminotransferase, which affects pleiotropic auxin-related processes

(2014) Takanori Yoshikawa et al.   PLANT JOURNAL

Branching Out in Roots: Uncovering Form, Function, and Regulation

(2014) J. A. Atkinson et al.   PLANT PHYSIOLOGY

OsARF16 Is Involved in Cytokinin-Mediated Inhibition of Phosphate Transport and Phosphate Signaling in Rice (Oryza sativa L.)

(2014) Chenjia Shen et al.   PLoS One

Strigolactones regulate rice tiller angle by attenuating shoot gravitropism through inhibiting auxin biosynthesis

(2014) D. Sang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell Surface ABP1-TMK Auxin-Sensing Complex Activates ROP GTPase Signaling

(2014) T. Xu et al.   SCIENCE

Genome studies and molecular genetics: understanding the functional genome based on the rice model

(2013) Qifa Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

Auxin metabolism and homeostasis during plant development

(2013) K. Ljung   DEVELOPMENT

A Role for a Dioxygenase in Auxin Metabolism and Reproductive Development in Rice

(2013) Zhigang Zhao et al.   DEVELOPMENTAL CELL

Evidence of oxidative attenuation of auxin signalling

(2013) Wendy Ann Peer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

(2013) Yusaku Uga et al.   NATURE GENETICS

Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield

(2013) Ken Ishimaru et al.   NATURE GENETICS

Auxin response factor (OsARF12), a novel regulator for phosphate homeostasis in rice (Oryza sativa)

(2013) SuiKang Wang et al.   NEW PHYTOLOGIST

Post-embryonic root organogenesis in cereals: branching out from model plants

(2013) Beata Orman-Ligeza et al.   TRENDS IN PLANT SCIENCE

Disturbed Local Auxin Homeostasis Enhances Cellular Anisotropy and Reveals Alternative Wiring of Auxin-ethylene Crosstalk in Brachypodium distachyon Seminal Roots

(2013) David Pacheco-Villalobos et al.   PLoS Genetics

The Biochemical Mechanism of Auxin Biosynthesis by anArabidopsisYUCCA Flavin-containing Monooxygenase

(2012) Xinhua Dai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A GH3 family member, OsGH3-2, modulates auxin and abscisic acid levels and differentially affects drought and cold tolerance in rice

(2012) Hao Du et al.   JOURNAL OF EXPERIMENTAL BOTANY

Distinctive expression patterns and roles of the miRNA393/TIR1 homolog module in regulating flag leaf inclination and primary and crown root growth in rice (Oryza sativa)

(2012) Hongwu Bian et al.   NEW PHYTOLOGIST

A large increase in IAA during development of rice grains correlates with the expression of tryptophan aminotransferaseOsTAR1and a grain-specificYUCCA

(2012) Yousef M. Abu-Zaitoon et al.   PHYSIOLOGIA PLANTARUM

OsARF16, a transcription factor, is required for auxin and phosphate starvation response in rice (Oryza sativaL.)

(2012) CHENJIA SHEN et al.   PLANT CELL AND ENVIRONMENT

The putative auxin efflux carrierOsPIN3tis involved in the drought stress response and drought tolerance

(2012) Qian Zhang et al.   PLANT JOURNAL

ATP-Binding Cassette B4, an Auxin-Efflux Transporter, Stably Associates with the Plasma Membrane and Shows Distinctive Intracellular Trafficking from That of PIN-FORMED Proteins

(2012) M. Cho et al.   PLANT PHYSIOLOGY

OsIAA13-mediated auxin signaling is involved in lateral root initiation in rice

(2012) Yuka Kitomi et al.   PLANT SCIENCE

OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice

(2012) Kuaifei Xia et al.   PLoS One

A Gain-of-Function Mutation in OsIAA11 Affects Lateral Root Development in Rice

(2011) Zhen-Xing Zhu et al.   Molecular Plant

OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa)

(2011) YanHua Qi et al.   NEW PHYTOLOGIST

Over-expression of OsPIN2 leads to increased tiller numbers, angle and shorter plant height through suppression of OsLAZY1

(2011) Yingnan Chen et al.   PLANT BIOTECHNOLOGY JOURNAL

vanishing tassel2Encodes a Grass-Specific Tryptophan Aminotransferase Required for Vegetative and Reproductive Development in Maize

(2011) Kimberly A. Phillips et al.   PLANT CELL

TheArabidopsisYUCCA1 Flavin Monooxygenase Functions in the Indole-3-Pyruvic Acid Branch of Auxin Biosynthesis

(2011) Anna N. Stepanova et al.   PLANT CELL

OsIAA23-mediated auxin signaling defines postembryonic maintenance of QC in rice

(2011) Ni Jun et al.   PLANT JOURNAL

Conversion of tryptophan to indole-3-acetic acid by TRYPTOPHAN AMINOTRANSFERASES OF ARABIDOPSIS and YUCCAs in Arabidopsis

(2011) C. Won et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The main auxin biosynthesis pathway in Arabidopsis

(2011) K. Mashiguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin Biosynthesis and Its Role in Plant Development

(2010) Yunde Zhao   Annual Review of Plant Biology

Nitrate-Regulated Auxin Transport by NRT1.1 Defines a Mechanism for Nutrient Sensing in Plants

(2010) Gabriel Krouk et al.   DEVELOPMENTAL CELL

Manipulating Broad-Spectrum Disease Resistance by Suppressing Pathogen-Induced Auxin Accumulation in Rice

(2010) J. Fu et al.   PLANT PHYSIOLOGY

Constitutive Expression ofOsGH3.1Reduces Auxin Content and Enhances Defense Response and Resistance to a Fungal Pathogen in Rice

(2009) Concha Domingo et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Two-Step Regulation of LAX PANICLE1 Protein Accumulation in Axillary Meristem Formation in Rice

(2009) T. Oikawa et al.   PLANT CELL

Characterization of OsIAA1 gene, a member of rice Aux/IAA family involved in auxin and brassinosteroid hormone responses and plant morphogenesis

(2009) Yaling Song et al.   PLANT MOLECULAR BIOLOGY

Altered Architecture and Enhanced Drought Tolerance in Rice via the Down-Regulation of Indole-3-Acetic Acid by TLD1/OsGH3.13 Activation

(2009) S.-W. Zhang et al.   PLANT PHYSIOLOGY

Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants

(2008) Yi Tao et al.   CELL

TAA1-Mediated Auxin Biosynthesis Is Essential for Hormone Crosstalk and Plant Development

(2008) Anna N. Stepanova et al.   CELL

NARROW LEAF 7 controls leaf shape mediated by auxin in rice

(2008) Kenji Fujino et al.   MOLECULAR GENETICS AND GENOMICS

Activation of the Indole-3-Acetic Acid-Amido Synthetase GH3-8 Suppresses Expansin Expression and Promotes Salicylate- and Jasmonate-Independent Basal Immunity in Rice

(2008) X. Ding et al.   PLANT CELL

Genetic and physical interaction suggest that BARREN STALK1 is a target of BARREN INFLORESCENCE2 in maize inflorescence development

(2008) Andrea Skirpan et al.   PLANT JOURNAL

NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis

(2008) Y. Cheng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA