Vacuolar degradation of chloroplast components: autophagy and beyond

ESCRT-mediated vesicle concatenation in plant endosomes

(2017) Rafael Andrade Buono et al.   JOURNAL OF CELL BIOLOGY

Entire Photodamaged Chloroplasts Are Transported to the Central Vacuole by Autophagy

(2017) Masanori Izumi et al.   PLANT CELL

ATG9 regulates autophagosome progression from the endoplasmic reticulum inArabidopsis

(2017) Xiaohong Zhuang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Autophagy Receptors and Neurodegenerative Diseases

(2017) Zhiqiang Deng et al.   TRENDS IN CELL BIOLOGY

ATG8 Expansion: A Driver of Selective Autophagy Diversification?

(2017) Ronny Kellner et al.   TRENDS IN PLANT SCIENCE

A chloroplast retrograde signal, 3’-phosphoadenosine 5’-phosphate, acts as a secondary messenger in abscisic acid signaling in stomatal closure and germination

(2017) Wannarat Pornsiriwong et al.   eLife

Comparative analyses of ubiquitin-like ATG8 and cysteine protease ATG4 autophagy genes in the plant lineage and cross-kingdom processing of ATG8 by ATG4

(2016) Eunyoung Seo et al.   Autophagy

TRIM21 Ubiquitylates SQSTM1/p62 and Suppresses Protein Sequestration to Regulate Redox Homeostasis

(2016) Ji-An Pan et al.   MOLECULAR CELL

Chloroplast quality control - balancing energy production and stress

(2016) Jesse D. Woodson   NEW PHYTOLOGIST

Chloroplast retrograde signal regulates flowering

(2016) Peiqiang Feng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sensing and signaling of oxidative stress in chloroplasts by inactivation of the SAL1 phosphoadenosine phosphatase

(2016) Kai Xun Chan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ubiquitin-Dependent And Independent Signals In Selective Autophagy

(2016) Aliaksandr Khaminets et al.   TRENDS IN CELL BIOLOGY

Autophagic Turnover of Inactive 26S Proteasomes in Yeast Is Directed by the Ubiquitin Receptor Cue5 and the Hsp42 Chaperone

(2016) Richard S. Marshall et al.   Cell Reports

Identification of Plastoglobules as a Site of Carotenoid Cleavage

(2016) Sarah Rottet et al.   Frontiers in Plant Science

Differential Subplastidial Localization and Turnover of Enzymes Involved in Isoprenoid Biosynthesis in Chloroplasts

(2016) Catalina Perello et al.   PLoS One

Protein Maturation and Proteolysis in Plant Plastids, Mitochondria, and Peroxisomes

(2015) Klaas J. van Wijk   Annual Review of Plant Biology

Double-edged alliance: mitochondrial surveillance by the UPS and autophagy

(2015) André Franz et al.   CURRENT OPINION IN CELL BIOLOGY

Chloroplast Stromules Function during Innate Immunity

(2015) Jeffrey L. Caplan et al.   DEVELOPMENTAL CELL

Autophagic Degradation of the 26S Proteasome Is Mediated by the Dual ATG8/Ubiquitin Receptor RPN10 in Arabidopsis

(2015) Richard S. Marshall et al.   MOLECULAR CELL

Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization

(2015) Faqiang Li et al.   PLANT CELL

The Endosomal Protein CHARGED MULTIVESICULAR BODY PROTEIN1 Regulates the Autophagic Turnover of Plastids in Arabidopsis

(2015) Christoph Spitzer et al.   PLANT CELL

Activation of autophagy by unfolded proteins during endoplasmic reticulum stress

(2015) Xiaochen Yang et al.   PLANT JOURNAL

Establishment of Monitoring Methods for Autophagy in Rice Reveals Autophagic Recycling of Chloroplasts and Root Plastids during Energy Limitation

(2015) Masanori Izumi et al.   PLANT PHYSIOLOGY

Ubiquitin facilitates a quality-control pathway that removes damaged chloroplasts

(2015) J. D. Woodson et al.   SCIENCE

How to control self-digestion: transcriptional, post-transcriptional, and post-translational regulation of autophagy

(2015) Yuchen Feng et al.   TRENDS IN CELL BIOLOGY

Chloroplasts are partially mobilized to the vacuole by autophagy

(2014) Hiroyuki Ishida et al.   Autophagy

Autophagic degradation of nuclear components in mammalian cells

(2014) Young-Eun Park et al.   Autophagy

Plant cell remodeling by autophagy

(2014) Jimi Kim et al.   Autophagy

ArabidopsisATG11, a scaffold that links the ATG1-ATG13 kinase complex to general autophagy and selective mitophagy

(2014) Faqiang Li et al.   Autophagy

Degradation of Organelles or Specific Organelle Components via Selective Autophagy in Plant Cells

(2014) Simon Michaeli et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Delayed degradation of chlorophylls and photosynthetic proteins in Arabidopsis autophagy mutants during stress-induced leaf yellowing

(2014) Yasuhito Sakuraba et al.   JOURNAL OF EXPERIMENTAL BOTANY

Interactions between Autophagy Receptors and Ubiquitin-like Proteins Form the Molecular Basis for Selective Autophagy

(2014) Vladimir Rogov et al.   MOLECULAR CELL

Stitching together the Multiple Dimensions of Autophagy Using Metabolomics and Transcriptomics Reveals Impacts on Metabolism, Development, and Plant Responses to the Environment in Arabidopsis

(2014) C. Masclaux-Daubresse et al.   PLANT CELL

AUTOPHAGY-RELATED11 Plays a Critical Role in General Autophagy- and Senescence-Induced Mitophagy in Arabidopsis

(2014) F. Li et al.   PLANT CELL

Arabidopsis ATG8-INTERACTING PROTEIN1 Is Involved in Autophagy-Dependent Vesicular Trafficking of Plastid Proteins to the Vacuole

(2014) S. Michaeli et al.   PLANT CELL

Stress-Induced Chloroplast Degradation inArabidopsisIs Regulated via a Process Independent of Autophagy and Senescence-Associated Vacuoles

(2014) Songhu Wang et al.   PLANT CELL

Different Mechanisms Are Responsible for Chlorophyll Dephytylation during Fruit Ripening and Leaf Senescence in Tomato

(2014) Luzia Guyer et al.   PLANT PHYSIOLOGY

Proteins with High Turnover Rate in Barley Leaves Estimated by Proteome Analysis Combined with in Planta Isotope Labeling

(2014) Clark J. Nelson et al.   PLANT PHYSIOLOGY

ATG5 defines a phagophore domain connected to the endoplasmic reticulum during autophagosome formation in plants

(2014) Romain Le Bars et al.   Nature Communications

Autophagic degradation of leaf starch in plants

(2013) Yan Wang et al.   Autophagy

Roles of autophagy in chloroplast recycling

(2013) Hiroyuki Ishida et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

In vivo inhibition of cysteine proteases provides evidence for the involvement of ‘senescence-associated vacuoles’ in chloroplast protein degradation during dark-induced senescence of tobacco leaves

(2013) Cristian A. Carrión et al.   JOURNAL OF EXPERIMENTAL BOTANY

Biogenesis and homeostasis of chloroplasts and other plastids

(2013) Paul Jarvis et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Autophagy Contributes to Leaf Starch Degradation

(2013) Y. Wang et al.   PLANT CELL

Highly Oxidized Peroxisomes Are Selectively Degraded via Autophagy in Arabidopsis

(2013) M. Shibata et al.   PLANT CELL

The Role of Autophagy in Chloroplast Degradation and Chlorophagy in Immune Defenses during Pst DC3000 (AvrRps4) Infection

(2013) Junjian Dong et al.   PLoS One

Differential processing of Arabidopsis ubiquitin-like Atg8 autophagy proteins by Atg4 cysteine proteases

(2013) J. Woo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Organelle Signaling: How Stressed Chloroplasts Communicate with the Nucleus

(2012) Jesse D. Woodson et al.   CURRENT BIOLOGY

Degradation of the Endoplasmic Reticulum by Autophagy during Endoplasmic Reticulum Stress in Arabidopsis

(2012) Y. Liu et al.   PLANT CELL

A New Type of Compartment, Defined by Plant-Specific Atg8-Interacting Proteins, Is Induced upon Exposure of Arabidopsis Plants to Carbon Starvation

(2012) A. Honig et al.   PLANT CELL

Salt-induced chloroplast protrusion is the process of exclusion of ribulose-1,5-bisphosphate carboxylase/oxygenase from chloroplasts into cytoplasm in leaves of rice

(2012) KOJI YAMANE et al.   PLANT CELL AND ENVIRONMENT

Chloroplast Biogenesis Is Regulated by Direct Action of the Ubiquitin-Proteasome System

(2012) Q. Ling et al.   SCIENCE

Autophagy: a multifaceted intracellular system for bulk and selective recycling

(2012) Faqiang Li et al.   TRENDS IN PLANT SCIENCE

The connection between ribophagy, autophagy and ribosomal RNA decay

(2011) Gustavo C. MacIntosh et al.   Autophagy

Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic adapters NBR1 and p62/SQSTM1

(2011) Steingrim Svenning et al.   Autophagy

Let's go bananas: revisiting the endocytic BAR code

(2011) Britta Qualmann et al.   EMBO JOURNAL

Rapamycin and Glucose-Target of Rapamycin (TOR) Protein Signaling in Plants

(2011) Yan Xiong et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The ATG1/ATG13 Protein Kinase Complex Is Both a Regulator and a Target of Autophagic Recycling in Arabidopsis

(2011) A. Suttangkakul et al.   PLANT CELL

Autophagy differentially controls plant basal immunity to biotrophic and necrotrophic pathogens

(2011) Heike D. Lenz et al.   PLANT JOURNAL

Starch: Its Metabolism, Evolution, and Biotechnological Modification in Plants

(2010) Samuel C. Zeeman et al.   Annual Review of Plant Biology

Chlorophyll breakdown in higher plants

(2010) Stefan Hörtensteiner et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Network organization of the human autophagy system

(2010) Christian Behrends et al.   NATURE

ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci

(2010) Taijoon Chung et al.   PLANT JOURNAL

The Autophagic Degradation of Chloroplasts via Rubisco-Containing Bodies Is Specifically Linked to Leaf Carbon Status But Not Nitrogen Status in Arabidopsis

(2010) M. Izumi et al.   PLANT PHYSIOLOGY

Blocking the Metabolism of Starch Breakdown Products in Arabidopsis Leaves Triggers Chloroplast Degradation

(2009) Michaela Stettler et al.   Molecular Plant

The ubiquitin–26S proteasome system at the nexus of plant biology

(2009) Richard D. Vierstra   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Dismantling of Arabidopsis thaliana mesophyll cell chloroplasts during natural leaf senescence

(2009) I. M. Evans et al.   PLANT BIOLOGY

The ESCRT-Related CHMP1A and B Proteins Mediate Multivesicular Body Sorting of Auxin Carriers in Arabidopsis and Are Required for Plant Development

(2009) C. Spitzer et al.   PLANT CELL

Autophagy Negatively Regulates Cell Death by Controlling NPR1-Dependent Salicylic Acid Signaling during Senescence and the Innate Immune Response in Arabidopsis

(2009) K. Yoshimoto et al.   PLANT CELL

The ATG12-Conjugating Enzyme ATG10 Is Essential for Autophagic Vesicle Formation in Arabidopsis thaliana

(2008) A. R. Phillips et al.   GENETICS

Arabidopsis thaliana leaves with altered chloroplast numbers and chloroplast movement exhibit impaired adjustments to both low and high light

(2008) M. Koniger et al.   JOURNAL OF EXPERIMENTAL BOTANY

‘Senescence-associated vacuoles’ are involved in the degradation of chloroplast proteins in tobacco leaves

(2008) Dana E. Martínez et al.   PLANT JOURNAL

The ATG Autophagic Conjugation System in Maize: ATG Transcripts and Abundance of the ATG8-Lipid Adduct Are Regulated by Development and Nutrient Availability

(2008) T. Chung et al.   PLANT PHYSIOLOGY

Autophagy Plays a Role in Chloroplast Degradation during Senescence in Individually Darkened Leaves

(2008) S. Wada et al.   PLANT PHYSIOLOGY

Mobilization of Rubisco and Stroma-Localized Fluorescent Proteins of Chloroplasts to the Vacuole by an ATG Gene-Dependent Autophagic Process

(2008) H. Ishida et al.   PLANT PHYSIOLOGY