Deep Learning for Brain MRI Segmentation: State of the Art and Future Directions

Large scale deep learning for computer aided detection of mammographic lesions

(2017) Thijs Kooi et al.   MEDICAL IMAGE ANALYSIS

Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation

(2017) Konstantinos Kamnitsas et al.   MEDICAL IMAGE ANALYSIS

Brain tumor segmentation with Deep Neural Networks

(2017) Mohammad Havaei et al.   MEDICAL IMAGE ANALYSIS

Deep 3D Convolutional Encoder Networks With Shortcuts for Multiscale Feature Integration Applied to Multiple Sclerosis Lesion Segmentation

(2016) Tom Brosch et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Automatic Segmentation of MR Brain Images With a Convolutional Neural Network

(2016) Pim Moeskops et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Automatic Detection of Cerebral Microbleeds From MR Images via 3D Convolutional Neural Networks

(2016) Qi Dou et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning

(2016) Hoo-Chang Shin et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Neural networks for computer-aided diagnosis in medicine: A review

(2016) Di lin et al.   NEUROCOMPUTING

Stratified mixture modeling for segmentation of white-matter lesions in brain MR images

(2016) Alfiia Galimzianova et al.   NEUROIMAGE

Deep MRI brain extraction: A 3D convolutional neural network for skull stripping

(2016) Jens Kleesiek et al.   NEUROIMAGE

Computer-Aided Diagnosis with Deep Learning Architecture: Applications to Breast Lesions in US Images and Pulmonary Nodules in CT Scans

(2016) Jie-Zhi Cheng et al.   Scientific Reports

Deep learning as a tool for increased accuracy and efficiency of histopathological diagnosis

(2016) Geert Litjens et al.   Scientific Reports

Bayesian Model Selection for Pathological Neuroimaging Data Applied to White Matter Lesion Segmentation

(2015) Carole H. Sudre et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Temporal Hierarchical Adaptive Texture CRF for Automatic Detection of Gadolinium-Enhancing Multiple Sclerosis Lesions in Brain MRI

(2015) Zahra Karimaghaloo et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

A Model of Population and Subject (MOPS) Intensities With Application to Multiple Sclerosis Lesion Segmentation

(2015) Xavier Tomas-Fernandez et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)

(2015) Bjoern H. Menze et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

ImageNet Large Scale Visual Recognition Challenge

(2015) Olga Russakovsky et al.   INTERNATIONAL JOURNAL OF COMPUTER VISION

Deep learning

(2015) Yann LeCun et al.   NATURE

LINKS: Learning-based multi-source IntegratioN frameworK for Segmentation of infant brain images

(2015) Li Wang et al.   NEUROIMAGE

Deep convolutional neural networks for multi-modality isointense infant brain image segmentation

(2015) Wenlu Zhang et al.   NEUROIMAGE

Automatic segmentation of MR brain images of preterm infants using supervised classification

(2015) Pim Moeskops et al.   NEUROIMAGE

Classifiers for Ischemic Stroke Lesion Segmentation: A Comparison Study

(2015) Oskar Maier et al.   PLoS One

A Logarithmic Opinion Pool Based STAPLE Algorithm for the Fusion of Segmentations With Associated Reliability Weights

(2014) Alireza Akhondi-Asl et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Automatic Whole Brain MRI Segmentation of the Developing Neonatal Brain

(2014) Antonios Makropoulos et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

A survey of MRI-based medical image analysis for brain tumor studies

(2013) Stefan Bauer et al.   PHYSICS IN MEDICINE AND BIOLOGY

Automatic Segmentation of Eight Tissue Classes in Neonatal Brain MRI

(2013) Petronella Anbeek et al.   PLoS One

Review of automatic segmentation methods of multiple sclerosis white matter lesions on conventional magnetic resonance imaging

(2012) Daniel García-Lorenzo et al.   MEDICAL IMAGE ANALYSIS

Robust Brain Extraction Across Datasets and Comparison With Publicly Available Methods

(2011) J. E. Iglesias et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Automated detection of multiple sclerosis lesions in serial brain MRI

(2011) Xavier Lladó et al.   NEURORADIOLOGY

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration

(2009) Arno Klein et al.   NEUROIMAGE

A topology-preserving approach to the segmentation of brain images with multiple sclerosis lesions

(2009) Navid Shiee et al.   NEUROIMAGE

An Optimized Blockwise Nonlocal Means Denoising Filter for 3-D Magnetic Resonance Images

(2008) P. Coupe et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Construction of a 3D probabilistic atlas of human cortical structures

(2007) David W. Shattuck et al.   NEUROIMAGE