4.7 Article

The study on interactions between levofloxacin and model proteins by using multi-spectroscopic and molecular docking methods

期刊

JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
卷 36, 期 8, 页码 2032-2044

出版社

TAYLOR & FRANCIS INC
DOI: 10.1080/07391102.2017.1341335

关键词

levofloxacin; model proteins; multi-spectral techniques; molecular docking

资金

  1. National Natural Science Foundation of China [21177163]
  2. 111 Project [B08044]
  3. Special Guidance Fund of Building World First-class Universities (Disciplines) and Characteristic Development of Minzu University of China [ydzxxk201619]
  4. Coordinate Development of First-Class and First-Class University Discipline Construction Funds
  5. Academic Team Construction Project of Minzu University of China [2015MDTD25C 13C]
  6. First-class Universities and First- class Discipline Construction Transitional Funds Under Special Funding

向作者/读者索取更多资源

The interactions of levofloxacin (LEV) with lysozyme (LYZ), trypsin and bovine hemoglobin (BHb) were investigated, respectively, by using multi-spectral techniques and molecular docking in vitro. Fluorescence studies showed that LEV quenched LYZ/trypsin fluorescence in a combined quenching ways and BHb fluorescence in a static quenching with binding constants of.14,.51 and.20 x 105 L mol-1 at 298 K, respectively. The thermodynamic parameters demonstrated that hydrophobic forces, hydrogen bonds, and van der Waals forces played the major role in the binding process. The binding distances between LEV and the inner tryptophan residues of LYZ, trypsin, and BHb were calculated to be 4.04, 3.38, and 4.52 nm, respectively. Furthermore, the results of circular dichroism spectra (CD), UV-vis, and three-dimensional fluorescence spectra indicated that the secondary structures of LYZ, trypsin, and BHb were partially changed by LEV with the a-helix percentage of LYZ-LEV system increased while that of BHb-LEV system was decreased, the ss sheet percentage of trypsin-LEV system increased from 41.3 to 42.9%. UV-vis spectral results showed that the binding interactions could cause conformational and some micro-environmental changes of LYZ, trypsin, and BHb. The results of molecular docking revealed that in LYZ and trypsin systems, LEV bound to the active sites residues GLU 35 and ASP 52 of LYZ and trypsin at the active site SER 195, and in BHb system, LEV was located in the central cavity, which was consistent with the results of synchronous fluorescence experiment. Besides, LEV made the activity of LYZ decrease while the activity of trypsin increased.

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