Critical residues and motifs for homodimerization of the first transmembrane domain of the plasma membrane glycoprotein CD36

The Transmembrane Domain of HIV-1 gp41 Inhibits T-Cell Activation by Targeting Multiple T-Cell Receptor Complex Components through Its GxxxG Motif

(2016) Etai Rotem et al.   BIOCHEMISTRY

Post-translational modifications of CD36 (SR-B2): Implications for regulation of myocellular fatty acid uptake

(2016) Joost J.F.P. Luiken et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

The enigmatic membrane fatty acid transporter CD36: New insights into fatty acid binding and their effects on uptake of oxidized LDL

(2016) Anthony G. Jay et al.   PROSTAGLANDINS LEUKOTRIENES AND ESSENTIAL FATTY ACIDS

The Enzymatic Activity of Lipases Correlates with Polarity-Induced Conformational Changes: A Trp-Induced Quenching Fluorescence Study

(2015) Jakob Skjold-Jørgensen et al.   BIOCHEMISTRY

Role of GxxxG Motifs in Transmembrane Domain Interactions

(2015) Mark G. Teese et al.   BIOCHEMISTRY

Oxidized LDL activates blood platelets through CD36/NOX2-mediated inhibition of the cGMP/protein kinase G signaling cascade

(2015) S. Magwenzi et al.   BLOOD

Insights into the Packing Switching of the EphA2 Transmembrane Domain by Molecular Dynamic Simulations

(2015) Fude Sun et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Oxidized LDL–bound CD36 recruits an Na+/K+-ATPase–Lyn complex in macrophages that promotes atherosclerosis

(2015) Yiliang Chen et al.   Science Signaling

Transmembrane Complexes of DAP12 Crystallized in Lipid Membranes Provide Insights into Control of Oligomerization in Immunoreceptor Assembly

(2015) Konstantin Knoblich et al.   Cell Reports

Oxidized LDL–bound CD36 recruits an Na+/K+-ATPase–Lyn complex in macrophages that promotes atherosclerosis

(2015) Yiliang Chen et al.   Science Signaling

Distance Mapping in Proteins Using Fluorescence Spectroscopy: Tyrosine, like Tryptophan, Quenches Bimane Fluorescence in a Distance-Dependent Manner

(2014) Amber M. Jones Brunette et al.   BIOCHEMISTRY

Coarse-grained molecular dynamics simulations of protein-ligand binding

(2014) Tatsuki Negami et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Molecular Dynamic Simulation of the Self-Assembly of DAP12-NKG2C Activating Immunoreceptor Complex

(2014) Peng Wei et al.   PLoS One

Coarse-grained simulations of the gating current in the voltage-activated Kv1.2 channel

(2014) Ilsoo Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Each of the four intracellular cysteines of CD36 is essential for insulin- or AMP-activated protein kinase-induced CD36 translocation

(2014) Masja M. van Oort et al.   ARCHIVES OF PHYSIOLOGY AND BIOCHEMISTRY

The Association of Polar Residues in the DAP12 homodimer: TOXCAT and Molecular Dynamics Simulation Studies

(2013) Peng Wei et al.   BIOPHYSICAL JOURNAL

Coarse-grain modelling of protein–protein interactions

(2013) Marc Baaden et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Molecular Dynamics Simulation by GROMACS Using GUI Plugin for PyMOL

(2013) Tomasz Makarewicz et al.   Journal of Chemical Information and Modeling

Scavenger receptor-BI is a receptor for lipoprotein(a)

(2013) Xiao-Ping Yang et al.   JOURNAL OF LIPID RESEARCH

Uptake of oxLDL and IL-10 Production by Macrophages Requires PAFR and CD36 Recruitment into the Same Lipid Rafts

(2013) Francisco J. O. Rios et al.   PLoS One

Current Concepts of the Role of Oxidized LDL Receptors in Atherosclerosis

(2012) Tanu Goyal et al.   Current Atherosclerosis Reports

Improved Parameters for the Martini Coarse-Grained Protein Force Field

(2012) Djurre H. de Jong et al.   Journal of Chemical Theory and Computation

Scavenger Receptor CD36 Expression Contributes to Adipose Tissue Inflammation and Cell Death in Diet-Induced Obesity

(2012) Lei Cai et al.   PLoS One

Glycine Dimerization Motif in the N-terminal Transmembrane Domain of the High Density Lipoprotein Receptor SR-BI Required for Normal Receptor Oligomerization and Lipid Transport

(2011) Leonid Gaidukov et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

From Coarse Grained to Atomistic: A Serial Multiscale Approach to Membrane Protein Simulations

(2011) Phillip J. Stansfeld et al.   Journal of Chemical Theory and Computation

The dimerization interface of the glycoprotein Ibβ transmembrane domain corresponds to polar residues within a leucine zipper motif

(2011) Peng Wei et al.   PROTEIN SCIENCE

Distance Mapping in Proteins Using Fluorescence Spectroscopy: The Tryptophan-Induced Quenching (TrIQ) Method

(2010) Steven E. Mansoor et al.   BIOCHEMISTRY

Molecular dynamics simulation with weak coupling to heat and material baths

(2010) Hossein Eslami et al.   JOURNAL OF CHEMICAL PHYSICS

Computer-aided drug design platform using PyMOL

(2010) Markus A. Lill et al.   JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

Comment on “On using a too large integration time step in molecular dynamics simulations of coarse-grained molecular models” by M. Winger, D. Trzesniak, R. Baron and W. F. van Gunsteren, Phys. Chem. Chem. Phys., 2009, 11, 1934

(2010) Siewert J. Marrink et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

The dimerization motif of the glycophorin A transmembrane segment in membranes: Importance of glycine residues

(2010) Bettina Brosig et al.   PROTEIN SCIENCE

CD36, a Scavenger Receptor Involved in Immunity, Metabolism, Angiogenesis, and Behavior

(2009) R. L. Silverstein et al.   Science Signaling

Uptake of long chain fatty acids is regulated by dynamic interaction of FAT/CD36 with cholesterol/sphingolipid enriched microdomains (lipid rafts)

(2008) Robert Ehehalt et al.   BMC CELL BIOLOGY

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

Coarse-Grained MD Simulations of Membrane Protein-Bilayer Self-Assembly

(2008) Kathryn A. Scott et al.   STRUCTURE