Gene expression analysis of blood, liver, and muscle in cattle divergently selected for high and low residual feed intake1

Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake

(2016) Rebecca S. G. Kong et al.   BMC GENOMICS

Post-weaning blood transcriptomic differences between Yorkshire pigs divergently selected for residual feed intake

(2016) Haibo Liu et al.   BMC GENOMICS

Identification of Gene Networks for Residual Feed Intake in Angus Cattle Using Genomic Prediction and RNA-seq

(2016) Kristina L. Weber et al.   PLoS One

Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake

(2016) Polyana C. Tizioto et al.   Scientific Reports

Extensive variation between tissues in allele specific expression in an outbred mammal

(2015) Amanda J. Chamberlain et al.   BMC GENOMICS

Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes

(2015) Polyana C Tizioto et al.   BMC GENOMICS

Hot topic: Definition and implementation of a breeding value for feed efficiency in dairy cows

(2015) J.E. Pryce et al.   JOURNAL OF DAIRY SCIENCE

The role of regulatory variation in complex traits and disease

(2015) Frank W. Albert et al.   NATURE REVIEWS GENETICS

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

A new approach for efficient genotype imputation using information from relatives

(2014) Mehdi Sargolzaei et al.   BMC GENOMICS

Estimation of genomic breeding values for residual feed intake in a multibreed cattle population1

(2014) M. Khansefid et al.   JOURNAL OF ANIMAL SCIENCE

Holstein-Friesian calves selected for divergence in residual feed intake during growth exhibited significant but reduced residual feed intake divergence in their first lactation

(2014) K.A. Macdonald et al.   JOURNAL OF DAIRY SCIENCE

Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle

(2014) Hans D Daetwyler et al.   NATURE GENETICS

A Multi-Trait, Meta-analysis for Detecting Pleiotropic Polymorphisms for Stature, Fatness and Reproduction in Beef Cattle

(2014) Sunduimijid Bolormaa et al.   PLoS Genetics

Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle1

(2013) S. Bolormaa et al.   JOURNAL OF ANIMAL SCIENCE

CELL BIOLOGY SYMPOSIUM: Genetics of feed efficiency in dairy and beef cattle1

(2013) D. P. Berry et al.   JOURNAL OF ANIMAL SCIENCE

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing

(2012) Elizabeth M Ross et al.   BMC GENETICS

Accuracy of genomic predictions of residual feed intake and 250-day body weight in growing heifers using 625,000 single nucleotide polymorphism markers

(2012) J.E. Pryce et al.   JOURNAL OF DAIRY SCIENCE

Global gene expression profiling reveals genes expressed differentially in cattle with high and low residual feed intake

(2011) Y. Chen et al.   ANIMAL GENETICS

Variation in residual feed intake in Holstein-Friesian dairy heifers in southern Australia

(2011) Y.J. Williams et al.   JOURNAL OF DAIRY SCIENCE

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Residual feed intake in beef cattle

(2009) J P.F. Arthur et al.   REVISTA BRASILEIRA DE ZOOTECNIA-BRAZILIAN JOURNAL OF ANIMAL SCIENCE

Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing

(2008) Ryan D. Morin et al.   BIOTECHNIQUES

Molecular basis for residual feed intake in beef cattle1

(2008) S. S. Moore et al.   JOURNAL OF ANIMAL SCIENCE

Physiological basis for residual feed intake1

(2008) R. M. Herd et al.   JOURNAL OF ANIMAL SCIENCE