The impact of elevated CO2 on Prochlorococcus and microbial interactions with ‘helper’ bacterium Alteromonas

Transcriptional response of Prochlorococcus to co-culture with a marine Alteromonas: differences between strains and the involvement of putative infochemicals

(2016) Dikla Aharonovich et al.   ISME Journal

Survival ofProchlorococcusin extended darkness

(2016) Allison Coe et al.   LIMNOLOGY AND OCEANOGRAPHY

Response of Prochlorococcus to varying CO2:O2 ratios

(2015) Sarah C Bagby et al.   ISME Journal

Convergent evolution toward an improved growth rate and a reduced resistance range inProchlorococcusstrains resistant to phage

(2015) Sarit Avrani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impact of ocean acidification on the structure of future phytoplankton communities

(2015) Stephanie Dutkiewicz et al.   Nature Climate Change

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

The Prochlorococcus carbon dioxide-concentrating mechanism: evidence of carboxysome-associated heterogeneity

(2014) Claire S. Ting et al.   PHOTOSYNTHESIS RESEARCH

The Minimal CO2-Concentrating Mechanism of Prochlorococcus spp. MED4 Is Effective and Efficient

(2014) B. M. Hopkinson et al.   PLANT PHYSIOLOGY

Effect of ocean acidification on cyanobacteria in the subtropical North Atlantic

(2012) MW Lomas et al.   AQUATIC MICROBIAL ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

Dependence of the Cyanobacterium Prochlorococcus on Hydrogen Peroxide Scavenging Microbes for Growth at the Ocean's Surface

(2011) J. Jeffrey Morris et al.   PLoS One

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Occurrence, phylogeny, structure, and function of catalases and peroxidases in cyanobacteria

(2009) Margit Bernroitner et al.   JOURNAL OF EXPERIMENTAL BOTANY

Facilitation of Robust Growth of Prochlorococcus Colonies and Dilute Liquid Cultures by "Helper" Heterotrophic Bacteria

(2008) J. J. Morris et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogeography of the ubiquitous marine bacteriumAlteromonas macleodiidetermined by multilocus sequence analysis

(2008) ELENA IVARS-MARTÍNEZ et al.   MOLECULAR ECOLOGY