PCVMZM: Using the Probabilistic Classification Vector Machines Model Combined with a Zernike Moments Descriptor to Predict Protein–Protein Interactions from Protein Sequences

Local-DPP: An improved DNA-binding protein prediction method by exploring local evolutionary information

(2017) Leyi Wei et al.   INFORMATION SCIENCES

Robust and accurate prediction of protein self-interactions from amino acids sequence using evolutionary information

(2016) Ji-Yong An et al.   Molecular BioSystems

A novel features ranking metric with application to scalable visual and bioinformatics data classification

(2016) Quan Zou et al.   NEUROCOMPUTING

Construction of reliable protein–protein interaction networks using weighted sparse representation based classifier with pseudo substitution matrix representation features

(2016) Yu-An Huang et al.   NEUROCOMPUTING

An ensemble approach for large-scale identification of protein- protein interactions using the alignments of multiple sequences

(2016) Lei Wang et al.   Oncotarget

Using the Relevance Vector Machine Model Combined with Local Phase Quantization to Predict Protein-Protein Interactions from Protein Sequences

(2016) Ji-Yong An et al.   Biomed Research International

HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy

(2015) Quan Zou et al.   BIOINFORMATICS

Integrative approaches for predicting microRNA function and prioritizing disease-related microRNA using biological interaction networks

(2015) Xiangxiang Zeng et al.   BRIEFINGS IN BIOINFORMATICS

Protein Sub-Nuclear Localization Based on Effective Fusion Representations and Dimension Reduction Algorithm LDA

(2015) Shunfang Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Prediction of Protein Structural Class Based on Gapped-Dipeptides and a Recursive Feature Selection Approach

(2015) Taigang Liu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Detection of Interactions between Proteins through Rotation Forest and Local Phase Quantization Descriptors

(2015) Leon Wong et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Prediction of Protein–Protein Interactions with Clustered Amino Acids and Weighted Sparse Representation

(2015) Qiaoying Huang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Using Weighted Sparse Representation Model Combined with Discrete Cosine Transformation to Predict Protein-Protein Interactions from Protein Sequence

(2015) Yu-An Huang et al.   Biomed Research International

Detecting Protein-Protein Interactions with a Novel Matrix-Based Protein Sequence Representation and Support Vector Machines

(2015) Zhu-Hong You et al.   Biomed Research International

Predicting Protein-Protein Interactions from Primary Protein Sequences Using a Novel Multi-Scale Local Feature Representation Scheme and the Random Forest

(2015) Zhu-Hong You et al.   PLoS One

An overview of SNP interactions in genome-wide association studies

(2014) P. Li et al.   Briefings in Functional Genomics

A Tri-Gram Based Feature Extraction Technique Using Linear Probabilities of Position Specific Scoring Matrix for Protein Fold Recognition

(2014) Kuldip K. Paliwal et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

A MapReduce based parallel SVM for large-scale predicting protein–protein interactions

(2014) Zhu-Hong You et al.   NEUROCOMPUTING

Large-Scale Protein-Protein Interactions Detection by Integrating Big Biosensing Data with Computational Model

(2014) Zhu-Hong You et al.   Biomed Research International

Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis

(2013) Zhu-Hong You et al.   BMC BIOINFORMATICS

Survey of MapReduce frame operation in bioinformatics

(2013) Q. Zou et al.   BRIEFINGS IN BIOINFORMATICS

Accurate calculation of Zernike moments

(2013) Chandan Singh et al.   INFORMATION SCIENCES

Efficient Probabilistic Classification Vector Machine With Incremental Basis Function Selection

(2013) Huanhuan Chen et al.   IEEE Transactions on Neural Networks and Learning Systems

PaGeFinder: quantitative identification of spatiotemporal pattern genes

(2012) J.-B. Pan et al.   BIOINFORMATICS

Assessing and predicting protein interactions by combining manifold embedding with multiple information integration

(2012) Ying-Ke Lei et al.   BMC BIOINFORMATICS

LIBSVM

(2012) Chih-Chung Chang et al.   ACM Transactions on Intelligent Systems and Technology

MINT, the molecular interaction database: 2012 update

(2011) Luana Licata et al.   NUCLEIC ACIDS RESEARCH

A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties of functional gene network

(2010) Zhu-Hong You et al.   BMC BIOINFORMATICS

High performance set of PseAAC and sequence based descriptors for protein classification

(2010) Loris Nanni et al.   JOURNAL OF THEORETICAL BIOLOGY

A study of entropy/clarity of genetic sequences using metric spaces and fuzzy sets

(2010) D.N. Georgiou et al.   JOURNAL OF THEORETICAL BIOLOGY

Exploring the sequence determinants of amyloid structure using position-specific scoring matrices

(2010) Sebastian Maurer-Stroh et al.   NATURE METHODS

Probabilistic Classification Vector Machines

(2009) Huanhuan Chen et al.   IEEE TRANSACTIONS ON NEURAL NETWORKS

An ensemble of support vector machines for predicting the membrane protein type directly from the amino acid sequence

(2008) Loris Nanni et al.   AMINO ACIDS

A genetic approach for building different alphabets for peptide and protein classification

(2008) Loris Nanni et al.   BMC BIOINFORMATICS

Complex Zernike Moments Features for Shape-Based Image Retrieval

(2008) S. Li et al.   IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART A-SYSTEMS AND HUMANS

Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences

(2008) Yanzhi Guo et al.   NUCLEIC ACIDS RESEARCH

Sequence-based prediction of protein-protein interactions by means of codon usage

(2008) Hamed Najafabadi et al.   GENOME BIOLOGY