Functional Analysis of Human Hub Proteins and Their Interactors Involved in the Intrinsic Disorder-Enriched Interactions
出版年份 2017 全文链接
标题
Functional Analysis of Human Hub Proteins and Their Interactors Involved in the Intrinsic Disorder-Enriched Interactions
作者
关键词
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出版物
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 18, Issue 12, Pages 2761
出版商
MDPI AG
发表日期
2017-12-19
DOI
10.3390/ijms18122761
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Transcriptional and post-translational regulation of Arc in synaptic plasticity
- (2018) Ruth E. Carmichael et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- Prokaryotic Ubiquitin-Like Protein and Its Ligase/Deligase Enyzmes
- (2017) Cyrille L. Delley et al. JOURNAL OF MOLECULAR BIOLOGY
- The role of ubiquitin-dependent segregase p97 (VCP or Cdc48) in chromatin dynamics after DNA double strand breaks
- (2017) Ignacio Torrecilla et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Structural and functional analysis of the human POT1-TPP1 telomeric complex
- (2017) Cory Rice et al. Nature Communications
- Intrinsic disorder in proteins involved in amyotrophic lateral sclerosis
- (2016) Nikolas Santamaria et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Untapped Potential of Disordered Proteins in Current Druggable Human Proteome
- (2016) Gang Hu et al. CURRENT DRUG TARGETS
- Multiple functions of p21 in cell cycle, apoptosis and transcriptional regulation after DNA damage
- (2016) Ansar Karimian et al. DNA REPAIR
- Non-canonical Interactions between Heat Shock Cognate Protein 70 (Hsc70) and Bcl2-associated Anthanogene (BAG) Co-Chaperones Are Important for Client Release
- (2016) Jennifer N. Rauch et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Role of Intrinsic Protein Disorder in the Function and Interactions of the Transcriptional Coactivators CREB-binding Protein (CBP) and p300
- (2016) H. Jane Dyson et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Autophagy-related intrinsically disordered proteins in intra-nuclear compartments
- (2016) Insung Na et al. Molecular BioSystems
- DisProt 7.0: a major update of the database of disordered proteins
- (2016) Damiano Piovesan et al. NUCLEIC ACIDS RESEARCH
- UniProt: the universal protein knowledgebase
- (2016) NUCLEIC ACIDS RESEARCH
- The BioGRID interaction database: 2017 update
- (2016) Andrew Chatr-aryamontri et al. NUCLEIC ACIDS RESEARCH
- Phosphoproteome analysis demonstrates the potential role of THRAP3 phosphorylation in androgen-independent prostate cancer cell growth
- (2016) Yoko Ino et al. PROTEOMICS
- Disordered nucleiome: Abundance of intrinsic disorder in the DNA- and RNA-binding proteins in 1121 species from Eukaryota, Bacteria and Archaea
- (2016) Chen Wang et al. PROTEOMICS
- Multiple-Localization and Hub Proteins
- (2016) Motonori Ota et al. PLoS One
- p21 Exploits Residue Tyr151 as a Tether for High-Affinity PCNA Binding
- (2015) Alice J. Kroker et al. BIOCHEMISTRY
- Native globular actin has a thermodynamically unstable quasi-stationary structure with elements of intrinsic disorder
- (2015) Irina M. Kuznetsova et al. FEBS Journal
- Compartmentalization and Functionality of Nuclear Disorder: Intrinsic Disorder and Protein-Protein Interactions in Intra-Nuclear Compartments
- (2015) Fanchi Meng et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- High-throughput prediction of RNA, DNA and protein binding regions mediated by intrinsic disorder
- (2015) Zhenling Peng et al. NUCLEIC ACIDS RESEARCH
- ELM 2016—data update and new functionality of the eukaryotic linear motif resource
- (2015) Holger Dinkel et al. NUCLEIC ACIDS RESEARCH
- Correlations between predicted protein disorder and post-translational modifications in plants
- (2014) Atsushi Kurotani et al. BIOINFORMATICS
- DISOPRED3: precise disordered region predictions with annotated protein-binding activity
- (2014) David T. Jones et al. BIOINFORMATICS
- Comprehensive large-scale assessment of intrinsic protein disorder
- (2014) Ian Walsh et al. BIOINFORMATICS
- Hsp90-Tau Complex Reveals Molecular Basis for Specificity in Chaperone Action
- (2014) G. Elif Karagöz et al. CELL
- Exceptionally abundant exceptions: comprehensive characterization of intrinsic disorder in all domains of life
- (2014) Zhenling Peng et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Short Linear Motifs: Ubiquitous and Functionally Diverse Protein Interaction Modules Directing Cell Regulation
- (2014) Kim Van Roey et al. CHEMICAL REVIEWS
- Pathological Unfoldomics of Uncontrolled Chaos: Intrinsically Disordered Proteins and Human Diseases
- (2014) Vladimir N. Uversky et al. CHEMICAL REVIEWS
- The DNA-binding domain mediates both nuclear and cytosolic functions of p53
- (2014) Ariele Viacava Follis et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A Sub-Element in PRE enhances nuclear export of intronless mRNAs by recruiting the TREX complex via ZC3H18
- (2014) B. Chi et al. NUCLEIC ACIDS RESEARCH
- CBP and p300 acetylate PCNA to link its degradation with nucleotide excision repair synthesis
- (2014) Ornella Cazzalini et al. NUCLEIC ACIDS RESEARCH
- MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins
- (2014) Emilio Potenza et al. NUCLEIC ACIDS RESEARCH
- MatrixDB, the extracellular matrix interaction database: updated content, a new navigator and expanded functionalities
- (2014) G. Launay et al. NUCLEIC ACIDS RESEARCH
- Structural polymorphism in the N-terminal oligomerization domain of NPM1
- (2014) D. M. Mitrea et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Occurrence of protein disulfide bonds in different domains of life: a comparison of proteins from the Protein Data Bank
- (2014) I. Bosnjak et al. PROTEIN ENGINEERING DESIGN & SELECTION
- The structural and functional signatures of proteins that undergo multiple events of post-translational modification
- (2014) Vikas Pejaver et al. PROTEIN SCIENCE
- A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome
- (2013) Zhenling Peng et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- The contribution of intrinsic disorder prediction to the elucidation of protein function
- (2013) Domenico Cozzetto et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Alternative splicing of intrinsically disordered regions and rewiring of protein interactions
- (2013) Marija Buljan et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Intrinsic Disorder-based Protein Interactions and their Modulators
- (2013) Vladimir N. Uversky CURRENT PHARMACEUTICAL DESIGN
- Intrinsic Structural Disorder in Cytoskeletal Proteins
- (2013) Mainak Guharoy et al. Cytoskeleton
- Regulated unfolding of proteins in signaling
- (2013) Diana M. Mitrea et al. FEBS LETTERS
- Identification of Wilms' Tumor 1-associating Protein Complex and Its Role in Alternative Splicing and the Cell Cycle
- (2013) Keiko Horiuchi et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Accurate prediction of disorder in protein chains with a comprehensive and empirically designed consensus
- (2013) Xiao Fan et al. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
- Global versus Local Hubs in Human Protein–Protein Interaction Network
- (2013) Manjari Kiran et al. JOURNAL OF PROTEOME RESEARCH
- THRAP3 Interacts with HELZ2 and Plays a Novel Role in Adipocyte Differentiation
- (2013) Akiko Katano-Toki et al. MOLECULAR ENDOCRINOLOGY
- Modulation of allostery by protein intrinsic disorder
- (2013) Allan Chris M. Ferreon et al. NATURE
- PUMA binding induces partial unfolding within BCL-xL to disrupt p53 binding and promote apoptosis
- (2013) Ariele Viacava Follis et al. Nature Chemical Biology
- mentha: a resource for browsing integrated protein-interaction networks
- (2013) Alberto Calderone et al. NATURE METHODS
- Electron microscopy structure of human APC/CCDH1–EMI1 reveals multimodal mechanism of E3 ligase shutdown
- (2013) Jeremiah J Frye et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- BID-induced structural changes in BAK promote apoptosis
- (2013) Tudor Moldoveanu et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
- (2013) Sandra Orchard et al. NUCLEIC ACIDS RESEARCH
- The eukaryotic linear motif resource ELM: 10 years and counting
- (2013) Holger Dinkel et al. NUCLEIC ACIDS RESEARCH
- A positive feedback loop links circadian clock factor CLOCK-BMAL1 to the basic transcriptional machinery
- (2013) L. Lande-Diner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Intrinsically disordered regions in autophagy proteins
- (2013) Yang Mei et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Assessment of protein disorder region predictions in CASP10
- (2013) Bohdan Monastyrskyy et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Genome-scale prediction of proteins with long intrinsically disordered regions
- (2013) Zhenling Peng et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- The switches.ELM Resource: A Compendium of Conditional Regulatory Interaction Interfaces
- (2013) K. Van Roey et al. Science Signaling
- Intrinsic Disorder in PTEN and its Interactome Confers Structural Plasticity and Functional Versatility
- (2013) Prerna Malaney et al. Scientific Reports
- Distinct Types of Disorder in the Human Proteome: Functional Implications for Alternative Splicing
- (2013) Recep Colak et al. PLoS Computational Biology
- Mechanism of Cell Cycle Entry Mediated by the Intrinsically Disordered Protein p27Kip1
- (2012) Li Ou et al. ACS Chemical Biology
- Cell cycle regulation by the intrinsically disordered proteins p21 and p27
- (2012) Mi-Kyung Yoon et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- MobiDB: a comprehensive database of intrinsic protein disorder annotations
- (2012) T. Di Domenico et al. BIOINFORMATICS
- MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins
- (2012) Fatemeh Miri Disfani et al. BIOINFORMATICS
- Disorder-function relationships for the cell cycle regulatory proteins p21 and p27
- (2012) Diana M. Mitrea et al. BIOLOGICAL CHEMISTRY
- Comprehensive Comparative Assessment of In-Silico Predictors of Disordered Regions
- (2012) Zhen-Ling Peng et al. CURRENT PROTEIN & PEPTIDE SCIENCE
- Intrinsically disordered proteins and novel strategies for drug discovery
- (2012) Vladimir N. Uversky Expert Opinion on Drug Discovery
- Tissue-Specific Splicing of Disordered Segments that Embed Binding Motifs Rewires Protein Interaction Networks
- (2012) Marija Buljan et al. MOLECULAR CELL
- Proteomic Investigations Reveal a Role for RNA Processing Factor THRAP3 in the DNA Damage Response
- (2012) Petra Beli et al. MOLECULAR CELL
- D2P2: database of disordered protein predictions
- (2012) Matt E. Oates et al. NUCLEIC ACIDS RESEARCH
- Regulation of actin-myosin interaction by conserved periodic sites of tropomyosin
- (2012) B. Barua et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Proteome-Wide Discovery of Evolutionary Conserved Sequences in Disordered Regions
- (2012) A. N. Nguyen Ba et al. Science Signaling
- Grb2, a Double-Edged Sword of Receptor Tyrosine Kinase Signaling
- (2012) A. A. Belov et al. Science Signaling
- The Intracellular Distal Tail of the Na+/H+Exchanger NHE1 Is Intrinsically Disordered: Implications for NHE1 Trafficking
- (2011) Ann-Beth Nørholm et al. BIOCHEMISTRY
- Hsp90 structure and function studied by NMR spectroscopy
- (2011) Tatiana Didenko et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
- ESpritz: accurate and fast prediction of protein disorder
- (2011) Ian Walsh et al. BIOINFORMATICS
- BIMEL, an intrinsically disordered protein, is degraded by 20S proteasomes in the absence of poly-ubiquitylation
- (2011) C. M. Wiggins et al. JOURNAL OF CELL SCIENCE
- A majority of the cancer/testis antigens are intrinsically disordered proteins
- (2011) Krithika Rajagopalan et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Proteins Associated with the Exon Junction Complex Also Control the Alternative Splicing of Apoptotic Regulators
- (2011) L. Michelle et al. MOLECULAR AND CELLULAR BIOLOGY
- Thermo-resistant intrinsically disordered proteins are efficient 20S proteasome substrates
- (2011) Peter Tsvetkov et al. Molecular BioSystems
- Intrinsically disordered proteins as molecular shields
- (2011) Sohini Chakrabortee et al. Molecular BioSystems
- Attributes of short linear motifs
- (2011) Norman E. Davey et al. Molecular BioSystems
- Intrinsic disorder mediates the diverse regulatory functions of the Cdk inhibitor p21
- (2011) Yuefeng Wang et al. Nature Chemical Biology
- MINT, the molecular interaction database: 2012 update
- (2011) Luana Licata et al. NUCLEIC ACIDS RESEARCH
- Context-dependent resistance to proteolysis of intrinsically disordered proteins
- (2011) Marcin J. Suskiewicz et al. PROTEIN SCIENCE
- Structure of the p53 Transactivation Domain in Complex with the Nuclear Receptor Coactivator Binding Domain of CREB Binding Protein
- (2010) Chul Won Lee et al. BIOCHEMISTRY
- Understanding protein non-folding
- (2010) Vladimir N. Uversky et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Cell Signaling by Receptor Tyrosine Kinases
- (2010) Mark A. Lemmon et al. CELL
- Oncogenic Partnerships: EWS-FLI1 Protein Interactions Initiate Key Pathways of Ewing's Sarcoma
- (2010) H. V. Erkizan et al. CLINICAL CANCER RESEARCH
- Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases
- (2010) David C. Bedford et al. Epigenetics
- Targeting intrinsically disordered proteins in neurodegenerative and protein dysfunction diseases: another illustration of the D2concept
- (2010) Vladimir N Uversky Expert Review of Proteomics
- Intrinsic disorder in proteins associated with neurodegenerative diseases
- (2010) Vladimir et al. Frontiers in Bioscience-Landmark
- Phosphorylation-Dependent Regulation of PSF by GSK3 Controls CD45 Alternative Splicing
- (2010) Florian Heyd et al. MOLECULAR CELL
- Post-translational modifications in signal integration
- (2010) Yonathan Lissanu Deribe et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- TRAP150 activates pre-mRNA splicing and promotes nuclear mRNA degradation
- (2010) Kuo-Ming Lee et al. NUCLEIC ACIDS RESEARCH
- Histidine Domain-Protein Tyrosine Phosphatase Interacts with Grb2 and GrpL
- (2010) Carmen-Alexandra Tanase PLoS One
- Revisiting Date and Party Hubs: Novel Approaches to Role Assignment in Protein Interaction Networks
- (2010) Sumeet Agarwal et al. PLoS Computational Biology
- Protein–Protein Interactions Essentials: Key Concepts to Building and Analyzing Interactome Networks
- (2010) Javier De Las Rivas et al. PLoS Computational Biology
- Pup, a prokaryotic ubiquitin-like protein, is an intrinsically disordered protein
- (2009) Shanhui Liao et al. BIOCHEMICAL JOURNAL
- Close encounters of the third kind: disordered domains and the interactions of proteins
- (2009) Peter Tompa et al. BIOESSAYS
- ANCHOR: web server for predicting protein binding regions in disordered proteins
- (2009) Z. Dosztanyi et al. BIOINFORMATICS
- Protein disorder in the human diseasome: unfoldomics of human genetic diseases
- (2009) Uros Midic et al. BMC GENOMICS
- Unfoldomics of human diseases: linking protein intrinsic disorder with diseases
- (2009) Vladimir N Uversky et al. BMC GENOMICS
- An Unbiased Screen Identifies DEP-1 Tumor Suppressor as a Phosphatase Controlling EGFR Endocytosis
- (2009) Gabi Tarcic et al. CURRENT BIOLOGY
- Structural basis for recruitment of CBP/p300 coactivators by STAT1 and STAT2 transactivation domains
- (2009) Jonathan M Wojciak et al. EMBO JOURNAL
- Grb2, a simple adapter with complex roles in lymphocyte development, function, and signaling
- (2009) Ihn Kyung Jang et al. IMMUNOLOGICAL REVIEWS
- Susceptibility of p53 Unstructured N Terminus to 20 S Proteasomal Degradation Programs the Stress Response
- (2009) Peter Tsvetkov et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The Mysterious Unfoldome: Structureless, Underappreciated, Yet Vital Part of Any Given Proteome
- (2009) Vladimir N. Uversky JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY
- SAFB1's multiple functions in biological control-lots still to be done!
- (2009) Jason P. Garee et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- Prokaryotic Ubiquitin-Like Protein Pup Is Intrinsically Disordered
- (2009) Xiang Chen et al. JOURNAL OF MOLECULAR BIOLOGY
- Rejuvenation of CcdB-Poisoned Gyrase by an Intrinsically Disordered Protein Domain
- (2009) Natalie De Jonge et al. MOLECULAR CELL
- The nanny model for IDPs
- (2009) Peter Tsvetkov et al. Nature Chemical Biology
- ELM: the status of the 2010 eukaryotic linear motif resource
- (2009) Cathryn M. Gould et al. NUCLEIC ACIDS RESEARCH
- Cooperative regulation of p53 by modulation of ternary complex formation with CBP/p300 and HDM2
- (2009) J. C. Ferreon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structural basis for subversion of cellular control mechanisms by the adenoviral E1A oncoprotein
- (2009) J. C. Ferreon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Unfoldomics of Human Genetic Diseases: Illustrative Examples of Ordered and Intrinsically Disordered Members of the Human Diseasome
- (2009) Uros Midic et al. PROTEIN AND PEPTIDE LETTERS
- Modularity of intrinsic disorder in the human proteome
- (2009) Melissa M. Pentony et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Identification, analysis, and prediction of protein ubiquitination sites
- (2009) Predrag Radivojac et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Assembly and mobility of exon-exon junction complexes in living cells
- (2009) U. Schmidt et al. RNA
- A Human Telomerase Holoenzyme Protein Required for Cajal Body Localization and Telomere Synthesis
- (2009) A. S. Venteicher et al. SCIENCE
- Intrinsic Structural Disorder Confers Cellular Viability on Oncogenic Fusion Proteins
- (2009) Hedi Hegyi et al. PLoS Computational Biology
- Intrinsically Disordered Proteins in Human Diseases: Introducing the D2 Concept
- (2008) Vladimir N. Uversky et al. Annual Review of Biophysics
- NMR Relaxation Study of the Complex Formed Between CBP and the Activation Domain of the Nuclear Hormone Receptor Coactivator ACTR†
- (2008) Marc-Olivier Ebert et al. BIOCHEMISTRY
- Regulation of Cell Division by Intrinsically Unstructured Proteins: Intrinsic Flexibility, Modularity, and Signaling Conduits†
- (2008) Charles A. Galea et al. BIOCHEMISTRY
- Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners
- (2008) Christopher J Oldfield et al. BMC GENOMICS
- PRMT1 mediated methylation of TAF15 is required for its positive gene regulatory function
- (2008) Laure Jobert et al. EXPERIMENTAL CELL RESEARCH
- Grb2 signaling in cell motility and cancer
- (2008) Alessio Giubellino et al. EXPERT OPINION ON THERAPEUTIC TARGETS
- Role of Intrinsic Flexibility in Signal Transduction Mediated by the Cell Cycle Regulator, p27Kip1
- (2008) Charles A. Galea et al. JOURNAL OF MOLECULAR BIOLOGY
- Phosphoproteomic Analysis of the Mouse Brain Cytosol Reveals a Predominance of Protein Phosphorylation in Regions of Intrinsic Sequence Disorder
- (2008) Mark O. Collins et al. MOLECULAR & CELLULAR PROTEOMICS
- Molecular Basis for Regulation of the Heat Shock Transcription Factor σ32 by the DnaK and DnaJ Chaperones
- (2008) Fernanda Rodriguez et al. MOLECULAR CELL
- Mechanism of apoptosis induction by inhibition of the anti-apoptotic BCL-2 proteins
- (2008) J. E. Chipuk et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure of tumor suppressor p53 and its intrinsically disordered N-terminal transactivation domain
- (2008) M. Wells et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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