Article
Microbiology
Tracy L. Diamond, Winnie Ngo, Min Xu, Shih Lin Goh, Silveria Rodriguez, Ming-Tain Lai, Ernest Asante-Appiah, Jay A. Grobler
Summary: Islatravir (ISL) is a nucleoside reverse transcriptase translocation inhibitor being developed for the treatment of HIV-1 infection. Resistance selection studies showed that ISL has a high barrier to resistance and a differentiated mechanism compared to approved nucleoside reverse transcriptase inhibitors (NRTIs).
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
(2022)
Article
Microbiology
Alexandre Nicolas, Julie Migraine, Jacques Dutrieux, Maud Salmona, Alexandra Tauzin, Atsuko Hachiya, Jerome Estaquier, Jean-Michel Molina, Francois Clavel, Allan J. Hance, Fabrizio Mammano
Summary: In this study, the genotypic and phenotypic diversity of replication-competent near-full-length HIV genomes were explored in eight patients with different delays in viremia control and treatment durations. The results showed that delayed effective treatment was associated with increased genetic diversity of the reservoir. The duration of treatment did not impact the diversity, but was associated with a higher frequency of clonally expanded sequences. Therefore, early treatment initiation has the advantage of reducing both the size and diversity of the reservoir.
MICROBIOLOGY SPECTRUM
(2022)
Article
Microbiology
Steven A. Kemp, Oscar J. Charles, Anne Derache, Werner Smidt, Darren P. Martin, Collins Iwuji, John Adamson, Katya Govender, Tulio de Oliveira, Francois Dabis, Deenan Pillay, Richard A. Goldstein, Ravindra K. Gupta
Summary: This study analyzed the whole-genome sequences of chronically infected HIV-1-positive individuals failing 2nd-line regimens under non-suppressive antiretroviral therapy. The findings revealed dramatic changes in virus population structure and highlighted viral diversification, recombination, and haplotype competition during non-suppressive ART.
Article
Multidisciplinary Sciences
Nonlawat Boonyalai, Chatchadaporn Thamnurak, Piyaporn Sai-ngam, Winita Ta-aksorn, Montri Arsanok, Nichapat Uthaimongkol, Siratchana Sundrakes, Sorayut Chattrakarn, Chaiyaporn Chaisatit, Chantida Praditpol, Watcharintorn Fagnark, Kirakarn Kirativanich, Suwanna Chaorattanakawee, Pattaraporn Vanachayangkul, Paphavee Lertsethtakarn, Panita Gosi, Darunee Utainnam, Wuttikon Rodkvamtook, Worachet Kuntawunginn, Brian A. Vesely, Michele D. Spring, Mark M. Fukuda, Charlotte Lanteri, Douglas Walsh, David L. Saunders, Philip L. Smith, Mariusz Wojnarski, Narongrid Sirisopana, Norman C. Waters, Krisada Jongsakul, Jariyanart Gaywee
Summary: Malaria remains a public health problem along the Thailand-Cambodia border, with resistant parasite strains detected in the majority of cases. The emergence and increase of multiple resistant genotypes from 2014 to 2015 emphasize the need for enhanced international cooperation in combating drug-resistant malaria parasites.
SCIENTIFIC REPORTS
(2021)
Article
Pharmacology & Pharmacy
Etienne E. Muller, Dumisile Maseko, Ranmini S. Kularatne
Summary: This study conducted phenotypic and genotypic surveillance on ACV resistance in HSV-2 derived from genital ulcer samples collected in a primary healthcare facility in South Africa. The results revealed no resistance-associated mutations, but identified several known natural polymorphisms and amino acid changes of unknown significance. All cultivable HSV-2 isolates showed susceptibility to ACV.
ANTIVIRAL RESEARCH
(2022)
Article
Genetics & Heredity
Fei Zhang, Bingyu Liang, Xu Liang, Zhaosen Lin, Yuan Yang, Na Liang, Yao Yang, Huayue Liang, Jiaxiao Jiang, Jiegang Huang, Rongye Huang, Shanmei Zhong, Cai Qin, Junjun Jiang, Li Ye, Hao Liang
Summary: In the Guangxi region, the prevalence of pretreatment drug resistance (PDR) is moderate, and resistance is associated with the CRF08_BC subtype. This suggests that drug resistance mutations (DRMs) may be spreading from injection drug users to heterosexuals, highlighting the importance of ongoing surveillance of PDR in the region.
FRONTIERS IN GENETICS
(2021)
Article
Infectious Diseases
Antoine Cheret, Rebecca Bauer, Vincent Meiffredy, Pauline Lopez, Faiza Ajana, Karine Lacombe, Philippe Morlat, Caroline Lascoux, Jacques Reynes, Ruxandra Calin, Sylvie Abel, Cecile Goujard, Christine Rouzioux, Veronique Avettand-Fenoel, Laurence Meyer
Summary: The study found that both dolutegravir-based and darunavir-based regimens significantly and similarly reduced the blood reservoir size during primary HIV-1 infection. Considering the rapid viral suppression during a period of high HIV-1 transmission risk, dolutegravir-based regimens are an important first-line treatment option.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2022)
Article
Microbiology
Michael T. Pyne, Keith E. Simmon, Melanie A. Mallory, Weston C. Hymas, Jeffery Stevenson, Adam P. Barker, David R. Hillyard
Summary: HIV-1 antiretroviral therapy management requires sequencing of different portions of the HIV-1 pol gene. Traditional Sanger sequencing has limited ability to detect minor variants. Next generation sequencing enables detection of variants at frequencies as low as 1%, allowing for earlier detection of resistance. However, implementation of NGS in the clinical laboratory is hindered by complicated design and analysis.
JOURNAL OF CLINICAL MICROBIOLOGY
(2022)
Article
Microbiology
Margaret Gartland, Pedro Cahn, Edwin DeJesus, Ricardo Sobhie Diaz, Robert Grossberg, Michael Kozal, Princy Kumar, Jean-Michel Molina, Fernando Mendo Urbina, Marcia Wang, Fangfang Du, Shiven Chabria, Andrew Clark, Louise Garside, Mark Krystal, Frank Mannino, Amy Pierce, Peter Ackerman, Max Lataillade
Summary: In the BRIGHTE study, fostemsavir plus optimized background therapy (OBT) showed sustained virologic suppression in heavily treatment-experienced adults with multidrug-resistant HIV-1. The occurrence of virologic failure was as expected in this difficult-to-treat population and was not consistently associated with treatment-emergent genotypic or phenotypic changes in susceptibility to fostemsavir or other antiretrovirals in the initial OBT.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
(2022)
Article
Immunology
Marta Santos Bravo, Nicolas Plault, Sonsoles Sanchez-Palomino, Cristina Rodriguez, Mireia Navarro Gabriel, Maria Mar Mosquera, Francesc Fernandez Aviles, Maria Suarez-Lledo, Montserrat Rovira, Marta Bodro, Asuncion Moreno, Laura Linares, Frederic Cofan, Carla Berengua, Cristina Esteva, Elisa Cordero, Pilar Martin-Davila, Maitane Aranzamendi, Ana Belen Perez Jimenez, Elisa Vidal, Nuria Fernandez Sabe, Oscar Len, Sebastien Hantz, Sophie Alain, Maria Angeles Marcos
Summary: This study investigates the genotypic and phenotypic characteristics of new genetic variants of human cytomegalovirus (HCMV) in a cohort of 94 clinically resistant patients. Mutations that confer resistance to antiviral drugs were found in the UL97, UL54, and UL56 genes of 25 out of 94 patients. The study also analyzes the effects of these mutations on viral growth and highlights the importance of expanding mutation databases for optimizing treatments and evaluating patients with resistant/refractory HCMV infection.
JOURNAL OF INFECTIOUS DISEASES
(2022)
Article
Infectious Diseases
Charlotte Charpentier, Alexandre Storto, Cathia Soulie, Valentine Marie Ferre, Marc Wirden, Veronique Joly, Sidonie Lambert-Niclot, Romain Palich, Laurence Morand-Joubert, Roland Landman, Karine Lacombe, Christine Katlama, Jade Ghosn, Anne-Genevieve Marcelin, Vincent Calvez, Diane Descamps
Summary: The study found that HIV-1 subtypes A6/A1 and the presence of rilpivirine RAMs are baseline risk factors associated with virological failure of cabotegravir+rilpivirine dual therapy among ARV-naive patients. Among large sequence databases, approximately 10.1% of patients would be ineligible for cabotegravir+rilpivirine dual therapy due to the presence of rilpivirine-resistant viruses and HIV-1 subtype A6/A1 sequences.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2021)
Article
Multidisciplinary Sciences
Ragkit Suvannaboon, Aulia Rahmi Pawestri, Worapoj Jinda, Aekkachai Tuekprakhon, Adisak Trinavarat, La-ongsri Atchaneeyasakul
Summary: This study evaluated the genetic prevalence and phenotypic profiles of Thai patients with RP, and found significant variations in RP-related genes among the Thai population. Among the detected genes, the EYS gene showed the highest prevalence.
SCIENTIFIC REPORTS
(2022)
Article
Infectious Diseases
Yizhak Hershko, Katia Levytskyi, Ella Rannon, Marc Assous, Shifra Ken-Dror, Sharon Amit, Haim Ben-Zvi, Orli Sagi, Orna Schwartz, Nadav Sorek, Moran Szwarcwort, Daniel Barkan, David Burstein, Amos Adler
Summary: This study aimed to determine the species distribution, antimicrobial susceptibility profiles, and investigate the associations between resistance traits and genotypic determinants in Nocardia. The results showed species-specific resistance patterns, often associated with the presence of resistance genes or mutations. This study provides a comprehensive understanding of Nocardia species diversity, antibiotic resistance patterns, and the molecular basis of antimicrobial resistance.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
(2023)
Article
Infectious Diseases
Xianwu Pang, Kailing Tang, Qin He, Jinghua Huang, Ningye Fang, Xinjuan Zhou, Qiuying Zhu, Xiuling Wu, Zhiyong Shen, Shujia Liang
Summary: The study found a TDR prevalence of 7.21% among newly diagnosed HIV-1 individuals in Guangxi. Being unmarried and having the CRF08_BC subtype were significantly associated with TDR prevalence.
BMC INFECTIOUS DISEASES
(2021)
Article
Virology
Claudia R. de Andrade Arrais, Kledoaldo Lima, Marta Barreiros, Jessyca K. F. Rodrigues, Nilviane P. S. Sousa, Daniel D. Costa, Francisco D. R. P. Santos, Gerson F. M. Pereira, Antonia I. e Silva Viana, Allan K. Barros, Elcio Leal
Summary: This study evaluated the genetic characterization of 132 HIV-1 pol sequences from children and adolescents undergoing antiretroviral therapy in Northeast Brazil. Most individuals harbored HIV-1 B and BF recombinants, with an overall antiretroviral resistance rate of 47%. The study highlighted the importance of surveillance of resistance mutations, with key mutations including M184V and K103N.
JOURNAL OF MEDICAL VIROLOGY
(2021)
Article
Biochemical Research Methods
E. Y. Wong, S. L. Diamond
ANALYTICAL BIOCHEMISTRY
(2008)
Article
Chemistry, Analytical
E. Y. Wong, S. L. Diamond
ANALYTICAL CHEMISTRY
(2009)
Article
Chemistry, Analytical
Kosin Teeparuksapun, Martin Hedstrom, Eric Y. Wong, Shixing Tang, Indira K. Hewlett, Bo Mattiasson
ANALYTICAL CHEMISTRY
(2010)
Article
Biotechnology & Applied Microbiology
Jiangqin Zhao, Shixing Tang, James Storhoff, Sudhakar Marla, Y. Paul Bao, Xue Wang, Eric Y. Wong, Viswanath Ragupathy, Zhiping Ye, Indira K. Hewlett
Article
Immunology
Shixing Tang, Jiangqin Zhao, Aifeng Wang, Ragupathy Viswanath, Harri Harma, Richard F. Little, Robert Yarchoan, Susan L. Stramer, Phillipe N. Nyambi, Sherwin Lee, Owen Wood, Eric Y. Wong, Xue Wang, Indira K. Hewlett
CLINICAL AND VACCINE IMMUNOLOGY
(2010)
Article
Chemistry, Medicinal
Ruchi Anand, Jasna Maksimoska, Nicholas Pagano, Eric Y. Wong, Phyllis A. Gimotty, Scott L. Diamond, Eric Meggers, Ronen Marmorstein
JOURNAL OF MEDICINAL CHEMISTRY
(2009)
Article
Chemistry, Organic
Nicholas Pagano, Eric Y. Wong, Tom Breiding, Haidong Liu, Alexander Wilbuer, Howard Bregman, Qi Shen, Scott L. Diamond, Eric Meggers
JOURNAL OF ORGANIC CHEMISTRY
(2009)
Article
Immunology
Erkki Lathouwers, Eric Y. Wong, Kimberley Brown, Bryan Baugh, Anne Ghys, John Jezorwski, El Ghazi Mohsine, Erika Van Landuyt, Magda Opsomer, Sandra De Meyer, S. De Wit, E. Florence, L. Vandekerckhove, B. Vandercam, J. Brunetta, M. Klein, D. Murphy, A. Rachlis, S. Walmsley, F. Ajana, L. Cotte, P-M Girard, C. Katlama, J-M Molina, I Poizot-Martin, F. Raffi, D. Rey, J. Reynes, E. Teicher, Y. Yazdanpanah, K. Arasteh, M. Bickel, J. Bogner, S. Esser, G. Faetkenheuer, H. Jessen, W. Kern, J. Rockstroh, C. Spinner, H-J Stellbrink, A. Stoehr, A. Antinori, F. Castelli, A. Chirianni, A. De Luca, A. Di Biagio, M. Galli, A. Lazzarin, F. Maggiolo, R. Maserati, C. Mussini, A. Garlicki, J. Gasiorowski, W. Halota, A. Horban, M. Parczewski, A. Piekarska, E. Belonosova, O. Chernova, N. Dushkina, V Kulagin, E. Ryamova, A. Shuldyakov, N. Sizova, O. Tsybakova, E. Voronin, A. Yakovlev, A. Antela, J. R. Arribas, J. Berenguer, J. Casado, V Estrada, M. J. Galindo, M. Garcia Del Toro, J. M. Gatell, M. Gorgolas, F. Gutierrez, M. D. M. Gutierrez, E. Negredo, J. A. Pineda, D. Podzamczer, J. Portilla Sogorb, A. Rivero, R. Rubio, P. Viciana, I De Los Santos, A. Clarke, B. G. Gazzard, M. A. Johnson, C. Orkin, I Reeves, L. Waters, P. Benson, L. Bhatti, F. Bredeek, G. Crofoot, D. Cunningham, E. DeJesus, J. Eron, F. Felizarta, R. Franco, J. Gallant, D. Hagins, K. Henry, D. Jayaweera, C. Lucasti, C. Martorell, C. McDonald, J. McGowan, A. Mills, J. Morales-Ramirez, D. Prelutsky, M. Ramgopal, B. Rashbaum, P. Ruane, J. Slim, A. Wilkin, J. deVente, M. Moutschen, E. Van Wijngaerden, L. Vekerckhove, B. Vercam, B. Conway, S. Shafran
AIDS RESEARCH AND HUMAN RETROVIRUSES
(2020)
Article
Infectious Diseases
Gregory D. Huhn, Joseph J. Eron, Pierre-Marie Girard, Chloe Orkin, Jean-Michel Molina, Edwin DeJesus, Romana Petrovic, Donghan Luo, Erika Van Landuyt, Erkki Lathouwers, Richard E. Nettles, Kimberley Brown, Eric Y. Wong
AIDS RESEARCH AND THERAPY
(2019)
Article
Infectious Diseases
Erkki Lathouwers, Sareh Seyedkazemi, Donghan Luo, Kimberley Brown, Sandra De Meyer, Eric Y. Wong
HIV RESEARCH & CLINICAL PRACTICE
(2020)
Article
Public, Environmental & Occupational Health
C. Benson, X. Wang, K. J. Dunn, N. Li, L. Mesana, J. Lai, E. Y. Wong, W. Chow, H. Hardy, J. Song, K. Brown
Article
Infectious Diseases
Bruce Rashbaum, Christoph D. Spinner, Cheryl McDonald, Cristina Mussini, John Jezorwski, Donghan Luo, Erika Van Landuyt, Kimberley Brown, Eric Y. Wong
HIV RESEARCH & CLINICAL PRACTICE
(2019)
Article
Health Policy & Services
Raniyah M. Copeland, Phill Wilson, Gabriela Betancourt, David Garcia, Murray Penner, Rebecca Abravanel, Eric Y. Wong, Lori D. Parisi
AIDS CARE-PSYCHOLOGICAL AND SOCIO-MEDICAL ASPECTS OF AIDS/HIV
(2017)