Conserved Patterns of Sex Chromosome Dosage Compensation in the Lepidoptera (WZ/ZZ): Insights from a Moth Neo-Z Chromosome

Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta

(2016) Michael R. Kanost et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Sex Chromosome Dosage Compensation inHeliconiusButterflies: Global yet Still Incomplete?

(2015) James R. Walters et al.   Genome Biology and Evolution

No X-Chromosome Dosage Compensation in Human Proteomes

(2015) Xiaoshu Chen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Numerous Transitions of Sex Chromosomes in Diptera

(2015) Beatriz Vicoso et al.   PLOS BIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Sex-Biased Gene Expression and Evolution of the X Chromosome in Nematodes

(2014) S. E. Albritton et al.   GENETICS

Complete Dosage Compensation and Sex-Biased Gene Expression in the Moth Manduca sexta

(2014) Gilbert Smith et al.   Genome Biology and Evolution

A single female-specific piRNA is the primary determiner of sex in the silkworm

(2014) Takashi Kiuchi et al.   NATURE

Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle

(2014) Songlin Chen et al.   NATURE GENETICS

Transcriptional control of a whole chromosome: emerging models for dosage compensation

(2014) Francesco Ferrari et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera

(2014) Virpi Ahola et al.   Nature Communications

The evolution of X chromosome inactivation in mammals: the demise of Ohno’s hypothesis?

(2013) Eugénie Pessia et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Role and control of X chromosome dosage in mammalian development

(2013) Edda G Schulz et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Transcriptome Sequencing Reveals the Character of Incomplete Dosage Compensation across Multiple Tissues in Flycatchers

(2013) Severin Uebbing et al.   Genome Biology and Evolution

Tissue- and Stage-Dependent Dosage Compensation on the Neo-X Chromosome in Drosophila pseudoobscura

(2013) Masafumi Nozawa et al.   MOLECULAR BIOLOGY AND EVOLUTION

Lack of Dosage Compensation Accompanies the Arrested Stage of Sex Chromosome Evolution in Ostriches

(2013) Sofia Adolfsson et al.   MOLECULAR BIOLOGY AND EVOLUTION

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Chromosomal Evolution in Tortricid Moths: Conserved Karyotypes with Diverged Features

(2013) Jindra Šíchová et al.   PLoS One

Timing and Patterns in the Taxonomic Diversification of Lepidoptera (Butterflies and Moths)

(2013) Niklas Wahlberg et al.   PLoS One

Neo-sex chromosomes and adaptive potential in tortricid pests

(2013) P. Nguyen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sex chromosome dosage compensation: definitely not for everyone

(2013) Judith E. Mank   TRENDS IN GENETICS

Comparative Sex Chromosome Genomics in Snakes: Differentiation, Evolutionary Strata, and Lack of Global Dosage Compensation

(2013) Beatriz Vicoso et al.   PLOS BIOLOGY

Incomplete Sex Chromosome Dosage Compensation in the Indian Meal Moth, Plodia interpunctella, Based on De Novo Transcriptome Assembly

(2012) Peter W. Harrison et al.   Genome Biology and Evolution

Linkage map of the peppered moth, Biston betularia (Lepidoptera, Geometridae): a model of industrial melanism

(2012) A E Van't Hof et al.   HEREDITY

Dosage compensation in Drosophila melanogaster: epigenetic fine-tuning of chromosome-wide transcription

(2012) Thomas Conrad et al.   NATURE REVIEWS GENETICS

Expression reduction in mammalian X chromosome evolution refutes Ohno's hypothesis of dosage compensation

(2012) F. Lin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome

(2012) E. Pessia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms and Evolutionary Patterns of Mammalian and Avian Dosage Compensation

(2012) Philippe Julien et al.   PLOS BIOLOGY

Error-Prone ZW Pairing and No Evidence for Meiotic Sex Chromosome Inactivation in the Chicken Germ Line

(2012) Silvana Guioli et al.   PLoS Genetics

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Lack of global meiotic sex chromosome inactivation, and paucity of tissue-specific gene expression on the Drosophila X chromosome

(2011) Lyudmila M Mikhaylova et al.   BMC BIOLOGY

General lack of global dosage compensation in ZZ/ZW systems? Broadening the perspective with RNA-seq

(2011) Jochen BW Wolf et al.   BMC GENOMICS

SOME INCONVENIENT TRUTHS ABOUT SEX CHROMOSOME DOSAGE COMPENSATION AND THE POTENTIAL ROLE OF SEXUAL CONFLICT

(2011) Judith E. Mank et al.   EVOLUTION

Getting a Full Dose? Reconsidering Sex Chromosome Dosage Compensation in the Silkworm, Bombyx mori

(2011) James R. Walters et al.   Genome Biology and Evolution

Lack of Global Dosage Compensation in Schistosoma mansoni, a Female-Heterogametic Parasite

(2011) Beatriz Vicoso et al.   Genome Biology and Evolution

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

He et al. reply

(2011) Xionglei He et al.   NATURE GENETICS

Sex Chromosome-Specific Regulation in the Drosophila Male Germline But Little Evidence for Chromosomal Dosage Compensation or Meiotic Inactivation

(2011) Colin D. Meiklejohn et al.   PLOS BIOLOGY

The MSL complex: X chromosome and beyond

(2010) Corey Laverty et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Targeting X chromosomes for repression

(2010) Barbara J Meyer   CURRENT OPINION IN GENETICS & DEVELOPMENT

Sex bias and dosage compensation in the zebra finch versus chicken genomes: General and specialized patterns among birds

(2010) Y. Itoh et al.   GENOME RESEARCH

The Relationship among Gene Expression, the Evolution of Gene Dosage, and the Rate of Protein Evolution

(2010) Jean-François Gout et al.   PLoS Genetics

Comparative Genomics on the Drosophila Phylogenetic Tree

(2009) Nadia D. Singh et al.   Annual Review of Ecology Evolution and Systematics

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Progress and prospects toward our understanding of the evolution of dosage compensation

(2009) Beatriz Vicoso et al.   CHROMOSOME RESEARCH

Drosophila dosage compensation: a complex voyage to the X chromosome

(2009) M. E. Gelbart et al.   DEVELOPMENT

The Silkworm Z Chromosome Is Enriched in Testis-Specific Genes

(2009) K. P. Arunkumar et al.   GENETICS

The Deficit of Male-Biased Genes on the D. melanogaster X Chromosome Is Expression-Dependent: A Consequence of Dosage Compensation?

(2009) Beatriz Vicoso et al.   JOURNAL OF MOLECULAR EVOLUTION

The W, X, Y and Z of sex-chromosome dosage compensation

(2009) Judith E. Mank   TRENDS IN GENETICS

Why does dosage compensation differ between XY and ZW taxa?

(2009) Sara Naurin et al.   TRENDS IN GENETICS

Female Meiotic Sex Chromosome Inactivation in Chicken

(2009) Sam Schoenmakers et al.   PLoS Genetics

Dosage analysis of Z chromosome genes using microarray in silkworm, Bombyx mori

(2008) Xingfu Zha et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY