Origin of rice (Oryza sativa L.) domestication genes

OsSPL13 controls grain size in cultivated rice

(2016) Lizhen Si et al.   NATURE GENETICS

Mapping quantitative trait loci (QTL) determining seed-shattering in weedy rice: evolution of seed shattering in weedy rice through de-domestication

(2015) Nan Yao et al.   EUPHYTICA

Population genetic structure ofOryza rufipogonandOryza nivara: implications for the origin ofO. nivara

(2015) Rong Liu et al.   MOLECULAR ECOLOGY

LABA1, a Domestication Gene Associated with Long, Barbed Awns in Wild Rice

(2015) Lei Hua et al.   PLANT CELL

The Birth of a Black Rice Gene and Its Local Spread by Introgression

(2015) Tetsuo Oikawa et al.   PLANT CELL

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Archaeological and genetic insights into the origins of domesticated rice

(2014) B. L. Gross et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping of Seed Shattering Loci Provides Insights into Origin of Weedy Rice and Rice Domestication

(2013) Prasanta K. Subudhi et al.   JOURNAL OF HEREDITY

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

Sequence polymorphisms in wild, weedy, and cultivated rice suggest seed-shattering locus sh4 played a minor role in Asian rice domestication

(2012) Yongqing Zhu et al.   Ecology and Evolution

Independent Domestication of Asian Rice Followed by Gene Flow from japonica to indica

(2011) C.-c. Yang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identification of a functional transposon insertion in the maize domestication gene tb1

(2011) Anthony Studer et al.   NATURE GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Two Evolutionary Histories in the Genome of Rice: the Roles of Domestication Genes

(2011) Ziwen He et al.   PLoS Genetics

Multiple introgression events surrounding the Hd1 flowering-time gene in cultivated rice, Oryza sativa L.

(2010) Kenji Fujino et al.   MOLECULAR GENETICS AND GENOMICS

Genetic Structure of Europeans: A View from the North–East

(2009) Mari Nelis et al.   PLoS One

The Genetic Architecture of Complex Traits in Teosinte (Zea mays ssp. parviglumis): New Evidence From Association Mapping

(2008) A. L. Weber et al.   GENETICS

Control of a key transition from prostrate to erect growth in rice domestication

(2008) Lubin Tan et al.   NATURE GENETICS

The Process of Rice Domestication: A New Model Based on Recent Data

(2008) Takeshi Izawa   Rice